Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00383 ATGACCATTAAGAGTTGTGGCTGCTTTGGAGCCTCAACTACAAAGAAGAAGAAAACTATAACTTCTCATAGTCCCAATGAAATTGATGGCTATCCCTTAGCCAATGTTAGGCAATTCTCTGATAAGGAACTGAGATTGGCAACTGATAATTATCATTCAAACAGTAAGATAGGAAGAGGAGGCTTTGGAACTGTTTTCCAGGGAACCTTAAAAGATGGAAGACAGGTAGCAGTGAAGACCCTTTCAGTTGGATCAAAGCAAGGAGTTCATGAATTCTTGACTGAAATTAAGACATTATCAAATGTTAGACATCCAAACCTTGTTGAATTGATTGGATTCTGCATTCAAGGACCTAGCCGCACATTAGTCTATGAGTATGTGGAAAATGGCAACCTTGATAGTGCATTACTTGGCACAAGGACTAAGAGAATTAAACTAGATTGGAGAAAAAGATCTGCTATTTGCATAGGTACTGCTAAAGGTCTTGCATTTCTTCATGAGGAAATTGTGCCACATATTGTACATAGAGACATCAAAGCTAGTAATGTACTACTCGACAAAGATTATAATCCGAAAATTGGTGATTTTGGATTGGCAAAGTTATTCCCAGATGACATTACTCACATCAGTACAAAAATTGCCGGAACAACGGGTTACTTAGCACCAGAATATGCATTAGGTGGACAGTTAACCATGAAAGCTGATATATACAGTTTTGGTGTTCTTGTGCTTGAAATCATTAGCGGCAAACGCAGCTCGAGGAGTAACTGGGGAGACTCCAACAAACTCCTATTGGAATGGGCATGGCAACTTCATGAAGAGGGTAGACATTTGGATATTGTGGATCCAGAGATGGAAGAGTTTCCAGAGGAAGAGGTGATGAAGTACATGAAGGTTGCATTGTTTTGCACACAGTCAGCAGCAAGCAGGAGGCCATTGATGACACAAGTGGTTGACATGCTGTCAAAGGAAATTCAGCTCAATGAGAGTCAATTACAACAACCAGGATTCTTCATGGATTCAAATGATGAATCCTCTCGGATCAAGTCAACTTCTGACTCTATAATTCCTAATGTTAGCTCTAGTCATAGTTTTACTCAGGTGGCCCCTCGATGA 1116 0.4005 MTIKSCGCFGASTTKKKKTITSHSPNEIDGYPLANVRQFSDKELRLATDNYHSNSKIGRGGFGTVFQGTLKDGRQVAVKTLSVGSKQGVHEFLTEIKTLSNVRHPNLVELIGFCIQGPSRTLVYEYVENGNLDSALLGTRTKRIKLDWRKRSAICIGTAKGLAFLHEEIVPHIVHRDIKASNVLLDKDYNPKIGDFGLAKLFPDDITHISTKIAGTTGYLAPEYALGGQLTMKADIYSFGVLVLEIISGKRSSRSNWGDSNKLLLEWAWQLHEEGRHLDIVDPEMEEFPEEEVMKYMKVALFCTQSAASRRPLMTQVVDMLSKEIQLNESQLQQPGFFMDSNDESSRIKSTSDSIIPNVSSSHSFTQVAPR 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00383 371 Gene3D Phosphorylase Kinase; domain 1 22 126 - -
Arst10g00383 371 PIRSF ILK 9 334 - -
Arst10g00383 371 Pfam Protein tyrosine and serine/threonine kinase 54 321 IPR001245 GO:0004672|GO:0006468
Arst10g00383 371 MobiDBLite consensus disorder prediction 336 371 - -
Arst10g00383 371 FunFam Putative LRR receptor-like serine/threonine-protein kinase 127 333 - -
Arst10g00383 371 SUPERFAMILY Protein kinase-like (PK-like) 35 354 IPR011009 -
Arst10g00383 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Arst10g00383 371 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 35 351 - -
Arst10g00383 371 ProSiteProfiles Protein kinase domain profile. 51 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00383 371 SMART serkin_6 51 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00383 371 Gene3D Transferase(Phosphotransferase) domain 1 127 344 - -
Arst10g00383 371 FunFam cold-responsive protein kinase 1 22 126 - -
Arst10g00383 371 CDD STKc_IRAK 57 323 - -
Arst10g00383 371 ProSitePatterns Protein kinases ATP-binding region signature. 57 79 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00383 Arst-Chr10 3141114 3143285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00383 39 370 Receptor kinase-like Gene Family AT1G56120 48.795 1.57e-108 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst10g00383 PK_Tyr_Ser-Thr 4.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00383 - - gmx:100788143 555.829