Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00358 ATGGAAATCGCAGATATTATGGGTGAAGTGGTTGGAAAGGAAGATCCAAAGGAACTCATCACAAGCAAAGGGAAGGAAACGAAGCGTCTAGCTATTTTGGTTGAAGATCTTGATAATTATCGTATTGGGTGTGTGTTGTTTGGGGACATGGTTGATCAAATACTACCATACCTAGATGATGGAAGAGTTGAACCATTGATAGTGGTCTTGCAGTTCTTCCGACCGAGTAGATGGAATGAGAAAACCTCAGTACAGAGTCATTTCGACATTTCTAAGCTACGCATCAATCCCGATCTCGAGGAGGTTCGCGACTTTCGTGACAGGAGGCTTGCCGCTATACCCTCAAATTTGGTCAGAATTAGTCAAGTCAACACAAACAACTCACATTCTGGGGCAGATGAACTTAAGCGGGGTGATGTGACGGTGAACACAATAGAGGAAGCACTAAACTCAACACAGGAAGGCCCTTTGTGGATTGCTGGAACAATTGTGGCAATCAATTCTGGCAAGGATGATTGGTTTTACAAATCATGTAGAAAGTGTCCGAAGAAGGTTGAAACACCAATTGGAAATAGATACGAGTGTGGAAAGTGTGGCCACACTCACGGAAGTGCATCGTTAAGGTTTAAGGTTGAGGTGATGGCCTATGATGGCACTGGTAGCATAACACTGCTTCTATGGGATCGAGAAACGGTTCAACTATGTGGTAGACAAGCAGAACAGATCAAGGATGAGGAGGAACTTTATGCTGAAGGATACCCTGCAGCTCTTGAGAGCCTGTTAGAAAGAAAACTTCTTTTTAAGGTGAATGTCAAATCCTCCAACATCAAGCTCTATGACCAGGTGTATACAGTGATGAAGGTCTGCGAGGATGATACAATTTTTGAAATGCATCTCCCAAATAAAACGTTCTCCACTGTAACTGATACCGGGTGCAGTAACTCGGTGGATTTGTCAGCAGCTATGGTTGATATCAACAATCTTAGTGATTCTCAATATTCTGTGGATGTTGTGGAGGATAGTGTTACAAGCCTCAAGTGCAAAACTCCAGCCAAAACAGCTACCATGGTTTTAAAGCAACAAATTCCCATCAACATTGAGAATGAAGAAGAACTGGGGTTTTCAACCAACAAACTTACCCGCAATCGTGGAAAAAGACAGAAGATGCAACTTCATGATAGCAATGAATGA 1191 0.4265 MEIADIMGEVVGKEDPKELITSKGKETKRLAILVEDLDNYRIGCVLFGDMVDQILPYLDDGRVEPLIVVLQFFRPSRWNEKTSVQSHFDISKLRINPDLEEVRDFRDRRLAAIPSNLVRISQVNTNNSHSGADELKRGDVTVNTIEEALNSTQEGPLWIAGTIVAINSGKDDWFYKSCRKCPKKVETPIGNRYECGKCGHTHGSASLRFKVEVMAYDGTGSITLLLWDRETVQLCGRQAEQIKDEEELYAEGYPAALESLLERKLLFKVNVKSSNIKLYDQVYTVMKVCEDDTIFEMHLPNKTFSTVTDTGCSNSVDLSAAMVDINNLSDSQYSVDVVEDSVTSLKCKTPAKTATMVLKQQIPINIENEEELGFSTNKLTRNRGKRQKMQLHDSNE 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00358 396 Gene3D - 1 112 IPR012340 -
Arst10g00358 396 Gene3D - 120 297 IPR012340 -
Arst10g00358 396 CDD RPA1_DBD_C 142 300 IPR047192 -
Arst10g00358 396 MobiDBLite consensus disorder prediction 375 396 - -
Arst10g00358 396 SUPERFAMILY Nucleic acid-binding proteins 143 298 IPR012340 -
Arst10g00358 396 PANTHER OS03G0429900 PROTEIN 59 291 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Arst10g00358 396 Pfam Replication factor-A C terminal domain 161 290 IPR013955 -
Arst10g00358 396 CDD RPA1_DBD_B_like 5 109 - -
Arst10g00358 396 SUPERFAMILY Nucleic acid-binding proteins 3 108 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00358 Arst-Chr10 2977260 2979177 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00358 3 351 Core DNA Replication Machinery Family AT4G19130 22.764 6.85e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00358 - - aip:107630584 764.607