LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst10g00341	ATGATGAAGCACATGAACTCGCAGCTTCTTCCACCATTTCTTGTATCAGTTATTGTTCTTTTGAGCTCAATATCTGCCACTGATTTTGTCTTCAATGGCTTCAACTCCTCTGATGTGTTGTTGTATGGGAATGCAACCATTGACTCAAGAATCCTAACCCTCACACATCACCAAACTTTCTCAGTTGGTCGTGCACTTTACCATAAGAAGATCCAAACCAAGAAGTCAAATTCTTCTTCCTATGTCTACCCTTTTTCCACTTCCTTTATATTCTCCATGGCACCTTTTAAGGACACTCTTCCTGGCCATGGATTTGTCTTCATCTTCACACCAGTCACTGGCATATTCCATGGTACAAGCACTGCTTCTCAGAATCTGGGGCTCTTCAACTTCACCAACAATGGAAATTCAAGCAACCATGTGTTTGGTGTTGAGTTTGATGTGTTCAAGAACCAGGAGTTTGACGACATAAGCGCCAACCATGTTGGGGTTGACATAAACTCTCTCACCTCTGTTGCATCTCATGATGCAGGGTATTGGCCAGATGAAGATCATGATTCTTTCAAGGAATTGAAGCTCAACAATGGTGAGAACTACCAAGTTTGGATTGAATATGAGGATTCTTTGCTCAATGTTACCATGGCAAAGGTTGGTATGAAAAGGCCTATGAAACCTTTGTTGAATGTTTCTCTTAACTTGTCTCAAGTTTTTGTAGATGAGATGTTTGTTGGATTTACCAGTTCCACAGGGCAATTAGTTGAGAGTCACAAGATTCTTGCTTGGAGTTTTAGCAACACTAATTCTTCATTAAGTGAAGAACTAATTACTACTGGTTTGCCCTCTTTTGTTCTTCCAAAGGATTCAATTTTCAAGTCAAAGAGGTTTGTTGCAGGGTTCACAGTAGGTATCTTCTTTGTTGTTTGTGTCTTTGTTTTGCTTGCAATGTTTTTGATTCGGAGAAAGAGAAGGCTTGAAAGGAAGAGAATGGAAATGGAAGATTGGGAGTTAGAGTATTGGCCACACAGAATGACATATGAAGAAATTGAGGCAGCAACAAAGGGATTCTGTGAGGAAAATGTGATTGGAGTTGGTGGCAATGGTAAGGTCTACAAGGGTGTTCTAAGAGGCGGCGCAGAGGTGGCCGTGAAGCGAATATCACAAGAGAACGACAGCGTGAGAGAGTTCCTAGCAGAAATTTCAAGCCTTGGCAGATTGAAGCAGAGAAACTTGGTTGCTCTGAGAGGATGGTGCAAGAAAGACATGGGAAATTTCTTGTTAGTTTATGAATACATGGATAATGGGAGTTTGGATAAGAGAGTGTTTTGTGATGAGAGCATGATGCTGAACTGTGAAGAGAGAATAAGAATCATCAAAGATGTGGCCTTTGCTGTGTTGTATTTGCATGAAGGTTGGGAAGAACAAGTTCTGCATAGGGACATCAAAGCCAGCAATGTGTTACTTGATAAAGATATGAATGGAAAGCTTGGAGACTTTGGATTAGCAAGAATGCATAGCCATGGCCAAGTTGCTAGCACAACAAAGTTGGTTGGAACAGTTGGTTACATGGCTCCAGAAGTGATCAAAACCGGACAAGCCTCGACTCGAACGGATGTGTACATGTTTGGAATCTTGATTTTAGAGATCATGTGTGGAAGGAGGCCTATGGAAGAAGGTAAGGCACCTCTTGTGGAGTTTTTGTGGGGACTAATGGTTAAAGGGGAACTAATCCATGCACTTGATGAGAGGTTAAGAGCTAAAGGAGACTTCAATCTGCAACAAGTTGAGAAGGTTCTTCAGTTGGGATTGTTGTGTGCATACCCTGAACCAAAATCAAGACCAAATATGAGACAAGTTGTGAGTATTTTAGAAGGGAACAACAATGAGGGAGGAGAAGAATCAGAGAATGAGAATGTGGATACTTGTTTGCTTCTAAAGTTGAAATCTGGGGATATTTTTGCTGAGTATTCTAATTATTTTAGCTATTCAACACACCCAACATTTCAAGATATTCGCCAGTCTAATACTTCTTCAATGTCTCTTACTTGGTCTAAATCTGTAGTTGAGGGTAGATGA	2073	0.4076	MMKHMNSQLLPPFLVSVIVLLSSISATDFVFNGFNSSDVLLYGNATIDSRILTLTHHQTFSVGRALYHKKIQTKKSNSSSYVYPFSTSFIFSMAPFKDTLPGHGFVFIFTPVTGIFHGTSTASQNLGLFNFTNNGNSSNHVFGVEFDVFKNQEFDDISANHVGVDINSLTSVASHDAGYWPDEDHDSFKELKLNNGENYQVWIEYEDSLLNVTMAKVGMKRPMKPLLNVSLNLSQVFVDEMFVGFTSSTGQLVESHKILAWSFSNTNSSLSEELITTGLPSFVLPKDSIFKSKRFVAGFTVGIFFVVCVFVLLAMFLIRRKRRLERKRMEMEDWELEYWPHRMTYEEIEAATKGFCEENVIGVGGNGKVYKGVLRGGAEVAVKRISQENDSVREFLAEISSLGRLKQRNLVALRGWCKKDMGNFLLVYEYMDNGSLDKRVFCDESMMLNCEERIRIIKDVAFAVLYLHEGWEEQVLHRDIKASNVLLDKDMNGKLGDFGLARMHSHGQVASTTKLVGTVGYMAPEVIKTGQASTRTDVYMFGILILEIMCGRRPMEEGKAPLVEFLWGLMVKGELIHALDERLRAKGDFNLQQVEKVLQLGLLCAYPEPKSRPNMRQVVSILEGNNNEGGEESENENVDTCLLLKLKSGDIFAEYSNYFSYSTHPTFQDIRQSNTSSMSLTWSKSVVEGR	690

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst10g00341	690	Gene3D	Phosphorylase Kinase; domain 1	317	430	-	-
	Arst10g00341	690	SMART	serkin_6	355	621	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst10g00341	690	Gene3D	-	25	278	-	-
	Arst10g00341	690	PANTHER	-	44	626	-	-
	Arst10g00341	690	SUPERFAMILY	Concanavalin A-like lectins/glucanases	25	268	IPR013320	-
	Arst10g00341	690	CDD	lectin_legume_LecRK_Arcelin_ConA	27	266	IPR001220	GO:0030246
	Arst10g00341	690	Pfam	Protein kinase domain	357	619	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst10g00341	690	Pfam	Legume lectin domain	27	269	IPR001220	GO:0030246
	Arst10g00341	690	Coils	Coil	317	337	-	-
	Arst10g00341	690	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	475	487	IPR008271	GO:0004672\|GO:0006468
	Arst10g00341	690	FunFam	Putative L-type lectin-domain containing receptor kinase VII.2	317	430	-	-
	Arst10g00341	690	FunFam	L-type lectin-domain containing receptor kinase S.4	25	271	-	-
	Arst10g00341	690	ProSiteProfiles	Protein kinase domain profile.	355	622	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst10g00341	690	SUPERFAMILY	Protein kinase-like (PK-like)	334	623	IPR011009	-
	Arst10g00341	690	FunFam	L-type lectin-domain containing receptor kinase S.4	431	636	-	-
	Arst10g00341	690	ProSitePatterns	Protein kinases ATP-binding region signature.	361	383	IPR017441	GO:0005524
	Arst10g00341	690	CDD	STKc_IRAK	361	622	-	-
	Arst10g00341	690	Gene3D	Transferase(Phosphotransferase) domain 1	431	648	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst10g00341	Arst-Chr10	2864578	2866908	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst10g00341	24	570	Receptor kinase-like Gene Family	AT4G04960	66.184	0.0	716

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Arst10g00341		Pkinase	6.7e-45	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst10g00341	-		-	gmx:100804391	1060.44