Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00337 ATGGAGAAGAAGCACCACCCTGGTGGTTCTACTTGCTCCACCAGAACTGAGAGAAAGTTCATTGAGAGAGAAAGAAGAAACCAAATGAAGGCACTCTATTCCAACCTCAATTCTCTTCTCCCTCCTCAAACTTCAAGGGAGGGAATTTCTTCACTGCCGGATCAGCTAGAGGAAGCCACAAACTACATAAAGAAGTTACAGGTGAAGCTGGAGAAAATGAAGGAAAAGAAGAACACATTATTAAGAACAATTCATCATCAAATACCAAATAATAGATCTCCACAAATTGAGATCCAACAAATGGGATTCACCTTAATGGTTGTTCTCATAACTGCCTTGGATTCTCATTATTTCATGTTCATTGAGGCCATTCGTGTTCTTCATGAAGAAGGTGCAGATGTTGTTAGCGCCAGTTACAAGGTTGTTCAACATGCTGTTTTCCATACAATGCACTGCCAGGTAGGGGAGTATGGCAATGGAGCTGCTGCGAGGATATCAGAGAGACTGAAGAAGTTTGTGAATGATTCTACCTATTGTCCCTTTTAG 546 0.4139 MEKKHHPGGSTCSTRTERKFIERERRNQMKALYSNLNSLLPPQTSREGISSLPDQLEEATNYIKKLQVKLEKMKEKKNTLLRTIHHQIPNNRSPQIEIQQMGFTLMVVLITALDSHYFMFIEAIRVLHEEGADVVSASYKVVQHAVFHTMHCQVGEYGNGAAARISERLKKFVNDSTYCPF 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00337 181 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 15 173 - -
Arst10g00337 181 Coils Coil 56 83 - -
Arst10g00337 181 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 13 66 IPR011598 GO:0046983
Arst10g00337 181 Pfam Helix-loop-helix DNA-binding domain 15 67 IPR011598 GO:0046983
Arst10g00337 181 SMART finulus 19 72 IPR011598 GO:0046983
Arst10g00337 181 Gene3D - 9 92 IPR036638 GO:0046983
Arst10g00337 181 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 14 89 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00337 Arst-Chr10 2820376 2821973 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00337 1 174 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 46.073 2.45e-45 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst10g00337 HLH 2.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00337 - - gmx:100784418 199.904