Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00336 ATGGTTGGAGCTTTCGAAGACTGGACCCGCAACTTCAACAACCCGTCCCGCCCTAAGAACCCCGCCGATTCCGTATTCGACTTCTCCAACGACGATTCCTTCCCTGCCTCCGCTGATGACGACTCCTCCTTCCGCCTCGTTGACGGTAAGCCCCCTCCAAGGCCCAAATTCGGCCCAAAGTGGCGCTTCCAGCAGCAGCGCCAGCTCCCCCAGCGCCGCGACGAGGAAGTCGAGGCCCGAAAGCGCGAGGCCGAGAAGGAACGTGCCCGCCGCGATCGCCTCTACCACCTCAACCGCTCAAACGCCAACGCCAACCGCCGCGAAGCCGCCGTGTTCAAATCGTCCGTCGATATCCAACCGGAATGGAACATGCATGACCAGATCCCCTTCTCCACCTTCTCAAAGCTCTCGTTCTCCGTCCCTGACCCCGAAGATCTCCTCCTATGCGGTGCTCTTGAGTACTACGACCGCACCTATGACCGCATCACACCGAAGAACGAGCGCCGCCTGGAGCGATTCAAGAATCGCAACTTCTTCAAAGTCACCACCACTGATGATCCCGTTATTCGCAGGCTCGCCAACGAGGACAAGGCGACGGTTTTTGCAACCGACACTATCCTCTCCACACTCATGTGCGCCCCTAGGTCGGTTTATTCATGGGACATCGTTGTGCAGCGCGTTGGGAACAAGTTGTTCTTCGATAAGCGTGATGGCTCCCAGCTTGATTTGCTCTCTGTTCATGAAACTTCCCAAGAGCCTCTTCCCGAGGCTAAGGATGATATCAACTCTGCACATTCGTTGAGTGTTGAAGCTGCTTATATTAACCAGAATTTCTCTCAACAGGTTCTTGTTAGGGACGGAAACAAGGTGAGTTTCGATGAACCTAATCCTTTTGCTAACGAGGGCGAGGAAGTTGCATCTGTGGCCTATAGGTATAGGAGGTGGAAGCTCGATAATGATATGTATCTCGTGGCGAGATGTGAGGTGCATAGTGTTCTTGAGCTGAATAAGAACAAGTCTTTCCTTACTTTGAATGCTTTGAATGAGTTTGATCCCAAGTATTCCGGTGTCGATTGGAGGCAGAAGTTGGAGACTCAAAGGGGAGCTGTGTTGGCCACTGAGCTCAAGAACAATGCTAATAAGTTGGCTAAGTGGACTGCGCAGGCGCTGTTGGCCGGCGCCGATATGATGAAGCTGGGATATGTGTCTAGAATCCATCCCCGTGACCATTTCAATCATGTGATTTTGGCTGTGGTTGGGTACAAGCCTAGGGACTTTGCGGCGCAAATCAATTTGAACACGTCTAATATGTGGGGAATTGTTAAGTCTATTGTGGACTTGTGCATGAAGCTCAATGAGGGTAAGTATGTTCTTGTGAAGGACCCGTCTAAGCCGCAGGTTAGGATCTATGAGGTCCCGCCCGATGCATTTGAAAACGACTATGTGGAGGAGCCACTTCCTGAGGAGGAACAAGTTCAACCTCCAGCAGAGGGTGCTGATGGTGTAGATACAAATGTTACTGCAAACGAGGCTGAGGCTAAGGAGATAGATGATCAAGCTTAG 1563 0.5195 MVGAFEDWTRNFNNPSRPKNPADSVFDFSNDDSFPASADDDSSFRLVDGKPPPRPKFGPKWRFQQQRQLPQRRDEEVEARKREAEKERARRDRLYHLNRSNANANRREAAVFKSSVDIQPEWNMHDQIPFSTFSKLSFSVPDPEDLLLCGALEYYDRTYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAHSLSVEAAYINQNFSQQVLVRDGNKVSFDEPNPFANEGEEVASVAYRYRRWKLDNDMYLVARCEVHSVLELNKNKSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLAGADMMKLGYVSRIHPRDHFNHVILAVVGYKPRDFAAQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFENDYVEEPLPEEEQVQPPAEGADGVDTNVTANEAEAKEIDDQA 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00336 520 MobiDBLite consensus disorder prediction 479 520 - -
Arst10g00336 520 PIRSF Transl_init_eIF3d 1 501 IPR007783 GO:0003743|GO:0005737|GO:0005852
Arst10g00336 520 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 3 471 IPR007783 GO:0003743|GO:0005737|GO:0005852
Arst10g00336 520 Coils Coil 72 92 - -
Arst10g00336 520 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 10 483 IPR007783 GO:0003743|GO:0005737|GO:0005852
Arst10g00336 520 MobiDBLite consensus disorder prediction 1 89 - -
Arst10g00336 520 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 2 494 IPR007783 GO:0003743|GO:0005737|GO:0005852
Arst10g00336 520 MobiDBLite consensus disorder prediction 67 89 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00336 2 518 Eukaryotic Initiation Factors Gene Family AT4G20980 79.213 0.0 863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00336 K03251 - gmx:100799613 892.878