Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00327 ATGGCTTCTCTCACTTCTCCCCTCTCCTCTCTCTCCCTCCACTCTCACACATCTTCTACTGCTGCTTCTTCACGTTTCTCTCTCCTGCCCGCTTCCAAACTCACCTTCAACTTCGCCGCCGCACGCCCCCGCACACTCACCCTCGCCGCCGCAAAATCCAAGCCCTCCGATGACATCGACACCTCGTTCTTCGACAACGTGAACCCAGAAGAGGAGGTCCCCTTCAACCCCCCAGAGGCCCCGGAAGGGTTCGTGGCCCCACCTTCCTTCGACGAAGGGCCAATGGAAACGGAAGACGAAATAGCCGCCGCATACGAAGAATTGTACGGACCGGCGTACAGTGGCGTGAGCGTTCTGGGAAACGACATATACGTGATGGACTCGAAGATGAAGAAGGATACTGGGTTCGGGTCGAAGGCGAAGAAGGAGAAGGTGAAGGATGGGTTCGAGGAGAGGGTGGTTCAGGTAAGGAGGGTGACGAAGGTGGTTAAGGGAGGAAAGCAGCTGAGGTTCAGGGCGGTGGTGGTGGTCGGAGACAAGAAGGGGAATGTAGGTGTGGGTGTTGGAAAGGCCAAAGAGGTCATTGCTGCTGTTCAGAAGTCTGCTGTTAATGCAAGGAGGAACATCATCACTGTTCCTTTGACTAAGTACTTGACTTTTCCACACAGAGCTGATGGAGATTATGGAGCAGCCAAGGTGATGCTGAGGCCTGCATCACCGGGTACCGGAGTGATTGCTGGTGGGGCGGTGAGGATTGTTCTCGAGATGGCCGGAGTTGAGAATGCTCTGGGAAAGCAACTAGGCAGCAACAATGCACTCAACAATGCCAGGGCAACTGTTGCTGCTGTTCAGAAAATGAAGCAGTTCCGTGAGGTTGCCCAAGAGCGTGGCATTCCAATGGAACAACTCTGGCAATGA 918 0.5458 MASLTSPLSSLSLHSHTSSTAASSRFSLLPASKLTFNFAAARPRTLTLAAAKSKPSDDIDTSFFDNVNPEEEVPFNPPEAPEGFVAPPSFDEGPMETEDEIAAAYEELYGPAYSGVSVLGNDIYVMDSKMKKDTGFGSKAKKEKVKDGFEERVVQVRRVTKVVKGGKQLRFRAVVVVGDKKGNVGVGVGKAKEVIAAVQKSAVNARRNIITVPLTKYLTFPHRADGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPMEQLWQ 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00327 305 SUPERFAMILY dsRNA-binding domain-like 146 214 - -
Arst10g00327 305 Gene3D - 139 210 - -
Arst10g00327 305 SUPERFAMILY Ribosomal protein S5 domain 2-like 219 297 IPR020568 -
Arst10g00327 305 Gene3D - 216 304 IPR014721 -
Arst10g00327 305 Hamap 30S ribosomal protein S5 [rpsE]. 130 302 IPR005712 GO:0003735|GO:0006412|GO:0015935
Arst10g00327 305 ProSiteProfiles S5 double stranded RNA-binding domain profile. 149 212 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Arst10g00327 305 ProSitePatterns Ribosomal protein S5 signature. 166 198 IPR018192 -
Arst10g00327 305 Pfam Ribosomal protein S5, N-terminal domain 149 213 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Arst10g00327 305 NCBIfam 30S ribosomal protein S5 147 301 IPR005712 GO:0003735|GO:0006412|GO:0015935
Arst10g00327 305 FunFam 30S ribosomal protein S5 138 210 - -
Arst10g00327 305 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN S5 138 299 IPR000851 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Arst10g00327 305 FunFam 30S ribosomal protein S5 214 305 - -
Arst10g00327 305 Pfam Ribosomal protein S5, C-terminal domain 226 296 IPR005324 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00327 149 289 Cytoplasmic Ribosomal Protein Gene Family AT2G41840 31.544 7.85e-17 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00327 K02988 - gmx:100787105 427.172