Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00326 ATGAAGTTCAACATTGCAAATCCCACCACTGGATGCCAAAAGAAGCTCGAGATCGATGATGATCAGAAGCTGCGAGCATTTTGGGACAAGAGAATCTCACAAGAGGTTCTTGGTGATGCTTTGGGTGAGGAATTTAAAGGCTATGTTTTCAAGATTACTGGAGGTTGTGATAAACAGGGATTTCCAATGAAGCAGGGAGTGTTGACACCTGGTCGCGTTCGCCTCTTGCTCCATAGAGGAACTCCTTGTTTCCGTGGATATGGAAGGCGCAATGGCGAGCGTAGGAGGAAGTCTGTTCGTGGGTGCATTGTCAGCCCAGACCTCTCTGTTCTGAACTTGGTAATTGTGAAGAAGGGTGACAATGATTTACCAGGCCTGACAGACATTGAAAAGCCAAGGATGAGGGGTCCAAAGAGAGCCTCCAAAATCCGCAAGCTGTTCAACCTTTCCAAGGAAGATGATGTGAGGAAGTATGTCAACACATACAGGAGGACATTCACAACCAAAAATGGGAAAAAGGTGAGTAAAGCTCCAAAGATACAAAGGTTGGTGACTCCCCTGACACTTCAAAGGAAGAGGGCAAGAATTTCTGATAAGAAGAAGAGAATTGCCAAAGCAAAATCAGAGGCAGCAGAGTACCAGAAACTCCTTGCCTCAAGGTTGAAGGAGCAAAGGGAACGCCGTAGTGAGAGTTTGGCTAAGAGGAGATCAAAGCTCTCCAGTGCTGCTGTTAAACAAGCTTCCTCTGCATAG 753 0.4635 MKFNIANPTTGCQKKLEIDDDQKLRAFWDKRISQEVLGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGDNDLPGLTDIEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKNGKKVSKAPKIQRLVTPLTLQRKRARISDKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSSAAVKQASSA 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00326 250 Coils Coil 189 216 - -
Arst10g00326 250 ProSitePatterns Ribosomal protein S6e signature. 52 63 IPR018282 GO:0003735|GO:0005840|GO:0006412
Arst10g00326 250 SMART Ribosomal_S6e_2 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Arst10g00326 250 PIRSF RPS6e 1 250 IPR014401 GO:0003735|GO:0005840|GO:0006412
Arst10g00326 250 Gene3D - 133 234 - -
Arst10g00326 250 PANTHER 40S RIBOSOMAL PROTEIN S6 1 240 IPR001377 GO:0003735|GO:0005840|GO:0006412
Arst10g00326 250 MobiDBLite consensus disorder prediction 219 250 - -
Arst10g00326 250 MobiDBLite consensus disorder prediction 219 235 - -
Arst10g00326 250 Pfam Ribosomal protein S6e 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00326 Arst-Chr10 2769613 2771817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00326 1 249 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 71.084 2.08e-119 337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04489 3 120215950 120217858 Arst10g00326 10 2769613 2771817 PCT