Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00322 ATGGGAGATAGTAGTTGGGGCGAGAGAAAGAGCATGAAGTACAATGAAGAAGAAGAAGAGGAAGATGAAGAATACCAAGACGAAGATGAAGGAAAAAAGAAGAGAGTAGTAGTGGTGAGCAACAAGAGAGCATCATCATCATCATGTACATGTCAAGTGGATGGTTGCAATGCAGATCTAAGCATTGCAAAGCAGTATCACAAGCGCCATAAGGTGTGTGAGTACCATGCCAAGGCTCACTCTGTTCTCATCTCTCAACAACACCAAAGGTTTTGCCAGCAATGTAGCAGGTTCCATGAGCTATCAGAATTTGATGACTCAAAAAGGAGTTGTAGAAGGCGTTTAGCTGGACACAATGAGAGGCGTCGCAAAAATTCATCAGATTGCCAAGGATAA 396 0.4293 MGDSSWGERKSMKYNEEEEEEDEEYQDEDEGKKKRVVVVSNKRASSSSCTCQVDGCNADLSIAKQYHKRHKVCEYHAKAHSVLISQQHQRFCQQCSRFHELSEFDDSKRSCRRRLAGHNERRRKNSSDCQG 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00322 131 Gene3D - 41 112 IPR036893 GO:0003677|GO:0005634
Arst10g00322 131 FunFam Squamosa promoter-binding-like protein 14 41 112 - -
Arst10g00322 131 MobiDBLite consensus disorder prediction 1 33 - -
Arst10g00322 131 Coils Coil 15 35 - -
Arst10g00322 131 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 30 126 IPR044817 GO:0003677
Arst10g00322 131 SUPERFAMILY SBT domain 50 128 IPR036893 GO:0003677|GO:0005634
Arst10g00322 131 Pfam SBP domain 51 124 IPR004333 GO:0003677
Arst10g00322 131 ProSiteProfiles Zinc finger SBP-type profile. 48 125 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00322 Arst-Chr10 2699040 2700301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00322 43 128 SBP-box Gene Family AT2G33810 74.419 6.53e-43 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Arst10g00322 SBP 1.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00322 - - gmx:100782285 164.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00322 10 2699040 2700301 Arst10g00322 10 2699040 2700301 ECH
Arst8g02810 8 38425511 38427120 Arst10g00322 10 2699040 2700301 ECH