Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00303 ATGGGGGTAGACTACTATAAGATTCTGCAGGTTGAAAAGAGTGCCACAGATGATGACTTGAAGAAAGCTTATAGAAAGCTTGCCATGAAATGGCACCCTGATAAGAATCCAAACAATAAGAAAGAAGCCGAGTCTAAATTCAAGCAGATATCCGAAGCCTATGAGGTTCTGAGTGATCCACAGAAGAGAGCAATTTATGATCAATATGGAGAAGAAGGGCTAAAAGGGCAAGTGCCACCTCCAGATGCAGCAGGTGCAGGTGGTGCTTCATTCTTCCAAACTGGTAATGGGGCAACAACGTTCAGATTCAATCCCAGGAATGCAGATGACATATTTGCCGAGTTCTTTGGATTTTCAAGCCCCTTCGGGGGAATGGGAGGTGGTGGTTCCGGTGCCGGTGCCGGTGCCGGTGCCGGCATGAGAGGCGGTGGAACAAGGTCATTTGGTGGAATCTTTGGTGATGATATATTCAGTTCATTTGGAGAAGGAAGGGCAATGAGTCAGGGTCCACGGAAGGCACCTCCTATAGAAAGAACATTGCCTTGCACCCTTGAAGAACTTTATAAGGGCACTACCAAAAAGATGAAGATCTCAAGGGAAATTGCTGATGCAAGCGGTAAAACTTTGCCGGTGGAGGAAATCTTAACCATAGAAATAAAACCGGGGTGGAAGAAAGGGACAAAGATAACGTTCCCGGAGAAAGGAAACGAGCAACCAAATGTGATTGCTGCAGATCTTGTGTTTGTGATTGATGAGAAAGCACACCGTGTGTTCACAAGAGATGGAAATGACTTGGTTGTGACACACAAGATTTCACTTTCTGAAGCTCTAACAGGTTACACTGTCCATTTGAAAACTCTAGATGGCAGGGTTCTTAGCATTCCCATAAACAATGTGATTCATCCAAGCTATGAAGAAGTGGTTCCTGGGGAAGGAATGCCAATTCCCAAAGATCCTTCTAAGAAGGGTAACCTTAGGATCAAGTTTGATATCAAGTTCCCAGCAAGGTTGACATCTGACCAAAAGACTGGACTTAGGAAACTTCTGGGGCCATAA 1056 0.4498 MGVDYYKILQVEKSATDDDLKKAYRKLAMKWHPDKNPNNKKEAESKFKQISEAYEVLSDPQKRAIYDQYGEEGLKGQVPPPDAAGAGGASFFQTGNGATTFRFNPRNADDIFAEFFGFSSPFGGMGGGGSGAGAGAGAGMRGGGTRSFGGIFGDDIFSSFGEGRAMSQGPRKAPPIERTLPCTLEELYKGTTKKMKISREIADASGKTLPVEEILTIEIKPGWKKGTKITFPEKGNEQPNVIAADLVFVIDEKAHRVFTRDGNDLVVTHKISLSEALTGYTVHLKTLDGRVLSIPINNVIHPSYEEVVPGEGMPIPKDPSKKGNLRIKFDIKFPARLTSDQKTGLRKLLGP 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00303 351 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Arst10g00303 351 PRINTS DnaJ domain signature 6 24 IPR001623 -
Arst10g00303 351 PRINTS DnaJ domain signature 62 81 IPR001623 -
Arst10g00303 351 PRINTS DnaJ domain signature 24 39 IPR001623 -
Arst10g00303 351 PRINTS DnaJ domain signature 42 62 IPR001623 -
Arst10g00303 351 CDD DnaJ 4 59 IPR001623 -
Arst10g00303 351 Gene3D - 255 334 - -
Arst10g00303 351 FunFam DnaJ subfamily B member 13 255 335 - -
Arst10g00303 351 FunFam DnaJ subfamily B member 13 3 126 - -
Arst10g00303 351 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Arst10g00303 351 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 349 - -
Arst10g00303 351 SUPERFAMILY HSP40/DnaJ peptide-binding domain 170 265 IPR008971 GO:0006457|GO:0051082
Arst10g00303 351 Pfam DnaJ domain 4 67 IPR001623 -
Arst10g00303 351 Pfam DnaJ C terminal domain 176 334 IPR002939 -
Arst10g00303 351 Gene3D - 175 254 - -
Arst10g00303 351 CDD DnaJ_C 174 337 - -
Arst10g00303 351 SMART dnaj_3 3 62 IPR001623 -
Arst10g00303 351 SUPERFAMILY Chaperone J-domain 3 128 IPR036869 -
Arst10g00303 351 Gene3D DnaJ domain 3 126 IPR036869 -
Arst10g00303 351 FunFam Dnaj homolog subfamily b member 172 253 - -
Arst10g00303 351 SUPERFAMILY HSP40/DnaJ peptide-binding domain 257 343 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00303 Arst-Chr10 2568915 2570492 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00303 5 69 C2H2 Transcription Factor Family AT1G74250 39.130 3.26e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00303 K09510 - cave:132172416 553.518