Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00302 ATGGGGTTGGACTACTATAGGACCTTGGAGGTAGAGAGAACTGCCACAGATGAAGACTTGAAGAAAGCTTATAGAAAGCTTGCCATGAAATGGCACCCTGATAAGAATCCAACCAACAACAAAGATGCTGAGACTAAATTCAAACAGATCTCTGAAGCCTATGAGGTTCTAAGTGATCCGCATAAGAGAGCAATTTGTGATCAATATGGAGAAGATGTCCTTAAAGGGAAAAGACAACCTCCTGGTGGTGGAGCTTCATTCTTCCATGGTGGGGATGGACCAACAATGTTTAGGTTCAACCCCAGAAATGCAGAAAGCATCTTTGCTGAAGTTTTTGGATGTTCAAGCCCCTATGGAGGAATGGGAATGGGAAGGGGAAGGGGCATGAGGGGTGGTTATGGTGGATCTTGGGTGTCAAGATCCTTTGGTGGAATATTTGGCAGTGACATGTTCAGTTCAGCTAGAGAAGAAGCCACACCCATGAATCAAAGTCCACGCAGGGCTCCTCCCATTGAAAACACACTACTTTGCACCCTTGAGGAACTTTACAAGGGCACTACCAAAAAGATGAAGATTTCAAGGGAAGTTGTGGATGCAAGTGGGAAAGTTATTCATGTGGAGGAAATCTTGACCATTGAAATCAAACCTGGCTGGAAAAAGGGAACAAAAGTCACATTCCAGGAGAAAGGAAACCAGCAGCCAAATGTAATTGCTGCAGATATTGTGTTCATCATTGATGAGAAGCCTCACAATGTGTTTACAAGAGACGGTAATGATTTGGTTGTCACAGAAGAGATATCACTTACCGAGGCTGAAGCACAATCAAGCTACACTGTCCATCTTACAACTCTAGATGGCAGGGATCTGACCATTGCTGTAAACAATGTGATTAGTCCAAACTATGAAGAGGTGGTTGCAGGAGAAGGTATGCCGTTTCCAAAGGATCCTTCAAAGAGGGGTGACCTTAGGATCAAGTTCAACATACTAGTCACAGACAAGGTTGATGCTGGGGCAGAAAATCAAAACTAG 1029 0.4393 MGLDYYRTLEVERTATDEDLKKAYRKLAMKWHPDKNPTNNKDAETKFKQISEAYEVLSDPHKRAICDQYGEDVLKGKRQPPGGGASFFHGGDGPTMFRFNPRNAESIFAEVFGCSSPYGGMGMGRGRGMRGGYGGSWVSRSFGGIFGSDMFSSAREEATPMNQSPRRAPPIENTLLCTLEELYKGTTKKMKISREVVDASGKVIHVEEILTIEIKPGWKKGTKVTFQEKGNQQPNVIAADIVFIIDEKPHNVFTRDGNDLVVTEEISLTEAEAQSSYTVHLTTLDGRDLTIAVNNVISPNYEEVVAGEGMPFPKDPSKRGDLRIKFNILVTDKVDAGAENQN 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00302 342 SUPERFAMILY HSP40/DnaJ peptide-binding domain 252 332 IPR008971 GO:0006457|GO:0051082
Arst10g00302 342 Gene3D - 170 248 - -
Arst10g00302 342 SUPERFAMILY Chaperone J-domain 4 96 IPR036869 -
Arst10g00302 342 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Arst10g00302 342 CDD DnaJ 4 59 IPR001623 -
Arst10g00302 342 CDD DnaJ_C 169 333 - -
Arst10g00302 342 Gene3D - 250 330 - -
Arst10g00302 342 Pfam DnaJ domain 4 67 IPR001623 -
Arst10g00302 342 Gene3D DnaJ domain 3 121 IPR036869 -
Arst10g00302 342 SUPERFAMILY HSP40/DnaJ peptide-binding domain 165 261 IPR008971 GO:0006457|GO:0051082
Arst10g00302 342 FunFam DnaJ subfamily B member 13 250 331 - -
Arst10g00302 342 FunFam Dnaj homolog subfamily b member 167 248 - -
Arst10g00302 342 Pfam DnaJ C terminal domain 172 328 IPR002939 -
Arst10g00302 342 SMART dnaj_3 3 62 IPR001623 -
Arst10g00302 342 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 334 - -
Arst10g00302 342 FunFam DnaJ subfamily B member 13 3 122 - -
Arst10g00302 342 PRINTS DnaJ domain signature 6 24 IPR001623 -
Arst10g00302 342 PRINTS DnaJ domain signature 24 39 IPR001623 -
Arst10g00302 342 PRINTS DnaJ domain signature 42 62 IPR001623 -
Arst10g00302 342 PRINTS DnaJ domain signature 62 81 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00302 Arst-Chr10 2566624 2568399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00302 5 74 C2H2 Transcription Factor Family AT1G74250 32.432 2.57e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00302 K09510 - gmx:100794650 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00302 10 2566624 2568399 Arst10g00302 10 2566624 2568399 ECH