Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00298 ATGCAAGAGAAAGGTCTATTAGCTCCTCGAAGGTCAAGGCACAGGTTAACTCCAGGAACAGTTAAATTTGCTGCCTTTCATGTTCTCTCACTTGAAGGTAGCAAGGGTCTAACAGTACTTGAGCTAGCAGAAAAAATTCAGAAATCTGGTCTTCGGGACCTGACCACCAGCAAGACACCAGAAGCATCAATTTCTGTTGCTTTGACTAGAGACACTAAGCTTTTTGAAAGGATAGCTCCATCAACCTATCGAGTGCGTACTGCATTTAGAAAGGATCCTGCTGATGCTGAGTCCATCCTTTCCGCAGCAAGAAAGAAAATTCAGATATTTGAAAATGGGTTTCCAGCTGGTGAAGATGCTGACGATGTTGAAAGAGAAGAGTCAGAAAGTGATGAAGTTGATGAGGATCCTGATGTTGATGATCTAGTAAACCCTTCAAGTGCTGATCCAATTTCTGGACATTTTGATGAACCAAATGTTTCCACACCAAATGGAAAAGAAAATTTGGATAATGATGTAAAACTTGATCAAAATGAGTTTGAAATAGATTTGCCTTGTTTTCCTGAGGATCGTTACAAGGAAGCTGATTGCCCTGGCTCTGTCACCGAACAACCTGTTGTTTGTGAAGATTTGAATACTGGAAATCCTGATCAAGATAATATGGAAATTGATGAAAGTCAATCTGGAGAATCCTGGGTGCAAGGACTTGCTGAAGGAGAGTATTCTGATCTCAGTGTAGAGGAGCGTCTAAATGCTCTAGTTGCATTGATTGGTGTGGCAAATGAAGGAAATTATATTCGTGTTGTTCTGGAGGATCGTCTGGAAGCAGCAAATGCTCTGAAGAAGCAGATGTGGGCTGAAGCACAGATAGATAAAGTTCGTCTGAAAGACGATACTATTAACAAACCAGATATTCCATTACTTATTGCCAACAAAGTTGAAACACATGACACATATCCTGCTGCTGTGGAGGGCAGTCAAAGTCCAATGCTGGACATCAATATTAATAGTATTAATATTGAAACATCACCTGGCACTGCAGAAAACCAAAAGCCAGCACCTGCTGCACAGAGCTTGCATGGTGAAAAGTCCTCCCAAATTCAAGATTTGTGCACAGGCACAGGTCCAGATCACCCTCAGGTGCAGGTACCTCCACAATATTCAAAAAGATCACGTTCACAGTTGAAATCTTATATTGCCCACATAGCAGAGGAGATGTGTATCTACAGGTCTTTACCCCTTGGCCAAGATCGCAGACGTAATCGATATTGGCAGTTTGTTGCTTCTGCTTCTAGCAATGATCCTGGTTCTGGTAGGATCTTTGTTGAATATCATGATGGCAATTGGGAGCTTATTGATTCTGAAGAGGCCCTTGATATTCTTTTGGCAGCATTGGATTCAAGGGGGATCAGGGAATCTCATCTGCGCTTGATGCTGAAAAGGATTGAGAAGTCCTTTAAAGAAAATGTTCGAAGGAATACACAATGTGCCAGTGCCAAAATAGGAAGCAAAGATAAATTTTCGATCAAAAGTGAAGAAAATAATGAACCATATTCAATACCTGATCGCCATGATGGAGCTGACAGTCCTAGCAGTACTCTTCATAACTTGAACTCTGACAAATTGGAAACATCATCATCCTTCAAGGACTTTCGCTACAAATAA 1665 0.412 MQEKGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDTKLFERIAPSTYRVRTAFRKDPADAESILSAARKKIQIFENGFPAGEDADDVEREESESDEVDEDPDVDDLVNPSSADPISGHFDEPNVSTPNGKENLDNDVKLDQNEFEIDLPCFPEDRYKEADCPGSVTEQPVVCEDLNTGNPDQDNMEIDESQSGESWVQGLAEGEYSDLSVEERLNALVALIGVANEGNYIRVVLEDRLEAANALKKQMWAEAQIDKVRLKDDTINKPDIPLLIANKVETHDTYPAAVEGSQSPMLDININSINIETSPGTAENQKPAPAAQSLHGEKSSQIQDLCTGTGPDHPQVQVPPQYSKRSRSQLKSYIAHIAEEMCIYRSLPLGQDRRRNRYWQFVASASSNDPGSGRIFVEYHDGNWELIDSEEALDILLAALDSRGIRESHLRLMLKRIEKSFKENVRRNTQCASAKIGSKDKFSIKSEENNEPYSIPDRHDGADSPSSTLHNLNSDKLETSSSFKDFRYK 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00298 554 MobiDBLite consensus disorder prediction 507 540 - -
Arst10g00298 554 Pfam HB1, ASXL, restriction endonuclease HTH domain 19 87 IPR007759 GO:0006355
Arst10g00298 554 MobiDBLite consensus disorder prediction 111 173 - -
Arst10g00298 554 MobiDBLite consensus disorder prediction 341 389 - -
Arst10g00298 554 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 227 267 IPR028942 -
Arst10g00298 554 MobiDBLite consensus disorder prediction 120 142 - -
Arst10g00298 554 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 549 IPR044977 GO:0006357
Arst10g00298 554 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 410 482 IPR028941 -
Arst10g00298 554 ProSiteProfiles HARE-type HTH domain profile. 19 88 IPR007759 GO:0006355
Arst10g00298 554 MobiDBLite consensus disorder prediction 507 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00298 Arst-Chr10 2562418 2564532 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00298 1 549 Homeobox Transcription Factor Family AT1G28420 52.727 6.52e-154 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00298 - - adu:107468213 1062.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00298 10 2562418 2564532 Arst10g00298 10 2562418 2564532 ECH
Arst3g04524 3 120519351 120528654 Arst10g00298 10 2562418 2564532 PCT