Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00297 ATGGAGGGGGAAGCTGCTTCGGATGCAGAGATTGAGAACAATAATACTCAGAAGAGGGAAGATGTTGTTGGTGATAACAGCAATGAGAACAACAATGGAAGCAACAGTAAAATTGGTAACTCGAATGAGGGTCAGAGCAAGCCCAAGCGACAGATGAAGACCCCGTTTCAGCTTGAGACACTGGAGAAAGCTTATGCTTTGGAGACTTACCCTTCAGAGACAATGAGGGCTGAGCTCTCTCAGAAGTTGGGGCTGTCCGATCGGCAGCTACAGATGTGGTTCTGCCACCGCCGGCTGAAGGACAAGAAGGATTTGCCGCCTAAGAAGCAGAAGAAGGCAGTGCCGGCGCCAGTGCCGGCGCCAGTGCCAGTGCCGGCACCACCTGTGCCAGATTCTCCTCCAGACCTCAGGCTGGGCCCTGAGCATGTTAATGAGTATGGATCAGGGTCAGGTTCGGGCTCCAGCCCGCTTACCCGCCCTGAGTTTCGAAATGTAGTTCCCCGGGGTGGTATGCTGGGGTACTATGAGCCACCACAAGCTATGATGGAGCTTAGAGCAATTGCTTGTGTGGAGGCACAGTTGGGGCAGCCACTGAGGGAAGATGGACCCATACTCGGAGTAGAGTTTGATCCTTTGCCCCCAGGTGCTTTTGGGGCACCCATAGCTGTTACAGAACAGCAAAAGCGACCTAGTCTTGCTTATGACAGTAAAATGTATGAAAGACACGATGTTAGAACAAATAAGGCTATGGCGAGGACATTACCGGAATATCCATTTCTTCCAAACCAGCCTGGCATTAGGTCAGATGCCTTTGGACAATTAAATCCACCTCATTTACACGATCCAATGGATGGTCCTTCCAGAACTTCCTTTCCTATAAATGAACAGCTGCACAAAATTCATGCTACCCAAAGTCATTCTGCTCGTGTTCGCGTTTCATCTCAGCAAGACAAGCAAGTGATTCCTTATCCATCTCCTCCTCGAGAAGTTGATGTTGCCCAGCCAAGGGAATCATATGCAAACATAGCTAATGCTGGAATAGACTCACACTTCGCCGATCATCCGATTGCTGGTCAAGAAAATCCTTATGCTTTACCCAGTGGACAAGTTTTGCAGAACGATATGACAATCCGAATAGAAAAGAAACGAAAGATTGATGATGCCAAAATTGCAAAGGAGGTTGAAGCCTATGAAACGAGGATGAGGAAAGAGCTTGAGAAGCAAGATAACCTTAGACGAAAGAATGAAGAGCGACTAAGGAAAGAAATGGAGAGACAAGAACGTGAAAGAAAAAAGGAAGAAGAGAGACTGATACGCGAGAGACAGCGAGAAGAGGAAAGATCTAGGCGTGAACAAAGACGTGAAATAGAACGGAGGGAAAAGTTTTTGATGAAAGAACACTTGAGAGCTGAGAAAAGAAGACGAAAAGAAGAGCTTCGCAAAGAAAAAGAGGCCGAGAGAAGGAAGGCTGCCCTTGAAAAGGCAGCTGCCCGTAGAATAGCTAAGGAATCTATGGAGCTTATTGAGGATGAACAGCTGGAATTGATGGAGCTGGCTGCTACAAGCAAGGGACTTTCCTCGATTATACAACTTGATCTTGATACATTGCAAAACCTTGAATCATTTAGGGATTCATTGTGTTTTTTCCCACCTAAGAGTGTAAAACTGAAAAGGCCATTTGCTATCCAACCTTGGATTGACTCTGATCAGAATGTTGGCAGCTTCTGA 1728 0.4682 MEGEAASDAEIENNNTQKREDVVGDNSNENNNGSNSKIGNSNEGQSKPKRQMKTPFQLETLEKAYALETYPSETMRAELSQKLGLSDRQLQMWFCHRRLKDKKDLPPKKQKKAVPAPVPAPVPVPAPPVPDSPPDLRLGPEHVNEYGSGSGSGSSPLTRPEFRNVVPRGGMLGYYEPPQAMMELRAIACVEAQLGQPLREDGPILGVEFDPLPPGAFGAPIAVTEQQKRPSLAYDSKMYERHDVRTNKAMARTLPEYPFLPNQPGIRSDAFGQLNPPHLHDPMDGPSRTSFPINEQLHKIHATQSHSARVRVSSQQDKQVIPYPSPPREVDVAQPRESYANIANAGIDSHFADHPIAGQENPYALPSGQVLQNDMTIRIEKKRKIDDAKIAKEVEAYETRMRKELEKQDNLRRKNEERLRKEMERQERERKKEEERLIRERQREEERSRREQRREIERREKFLMKEHLRAEKRRRKEELRKEKEAERRKAALEKAAARRIAKESMELIEDEQLELMELAATSKGLSSIIQLDLDTLQNLESFRDSLCFFPPKSVKLKRPFAIQPWIDSDQNVGSF 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00297 575 Coils Coil 465 496 - -
Arst10g00297 575 CDD homeodomain 49 98 IPR001356 GO:0003677
Arst10g00297 575 MobiDBLite consensus disorder prediction 112 135 - -
Arst10g00297 575 MobiDBLite consensus disorder prediction 26 53 - -
Arst10g00297 575 Gene3D - 30 105 - -
Arst10g00297 575 SUPERFAMILY Homeodomain-like 33 103 IPR009057 -
Arst10g00297 575 MobiDBLite consensus disorder prediction 101 161 - -
Arst10g00297 575 Coils Coil 394 459 - -
Arst10g00297 575 MobiDBLite consensus disorder prediction 420 453 - -
Arst10g00297 575 Pfam Homeodomain 47 103 IPR001356 GO:0003677
Arst10g00297 575 MobiDBLite consensus disorder prediction 1 57 - -
Arst10g00297 575 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 29 574 IPR044977 GO:0006357
Arst10g00297 575 SMART HOX_1 46 108 IPR001356 GO:0003677
Arst10g00297 575 ProSiteProfiles 'Homeobox' domain profile. 44 104 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00297 Arst-Chr10 2557046 2561335 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00297 44 575 Homeobox Transcription Factor Family AT5G44180 48.411 1.01e-126 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Arst10g00297 Homeodomain 3.5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00297 - - gmx:100777465 669.848