Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00293 ATGGCATGGTGCAATGAGACTCATGAGAAAGAGATCATTGCTTCCAATAATAGTACTATTACTCTTAGACCTAAATCCGACCAAGAAATTCGAAACATAAGTTGCCCCTCATGTAGCCATAACATTCAAATAATCCAAGAGCAGGGTGGAATTCATGAGTTGCCAGGGTTACCAGCTGGAGCGAAGTTTGACCCAAATGACATTGAAATATTGGAGCATTTGGAGGCAAAAGTTATGTCTCATGTGCCCAACCTTCATCCTCTCATTGATGAATTCATACCAACGCTTCAAGACGAGAATGGCATCTGTTATACACACCCAGAGAAGCTACCAGGAGTAAAGAAAGATGGGCAGATTCGGCACTTCTTCCACAGGCCTTCAAAAGCATACACAACAGGAACAAGGAAGAGAAGAAAGGTTCACACCGATGAAGATGGAAGCGAAACAAGGTGGCACAAAACCGGAAAAACAAGAGCGGTGGTGGCCGGCGGCCTAGTCAAGGGGTTCAAGAAGATTCTAGTACTATACACCAACTATGGGAGGCAAAAAAAGCCTGAGAAAACTAACTGGGTGATGCATCAATACCATCTTGGAAGCAATGAAGAAGAGAGAGATGGAGAACTAGTAGTTTCAAAAGTGTTCTATCAAACACAACCTAGACAATGCGGCAATTCCATTGTTATAAAGGAAGATGATGATGATCTTCCCTATGGAAAGATATTGATGATGAATAACAGAAAGAAGCACAAAAATAATGATGATGCTGCTCCTGTTGTGGACTACTACATAAATTATGACCATGTTGAGCATCATCATAATCACAATCATAATAGCCAAAGATGTTCATCACCTACTCAACTTATTCCAAACTTGGTTCTCCAAGGTGATTCCTCTTCTCTTTTTCGCTTTGCTTCATCATCACTGGATGGGAATGCCAACAAAACAAGACTTTTTGAGAGAAAGTTGTAG 969 0.4107 MAWCNETHEKEIIASNNSTITLRPKSDQEIRNISCPSCSHNIQIIQEQGGIHELPGLPAGAKFDPNDIEILEHLEAKVMSHVPNLHPLIDEFIPTLQDENGICYTHPEKLPGVKKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEDGSETRWHKTGKTRAVVAGGLVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEERDGELVVSKVFYQTQPRQCGNSIVIKEDDDDLPYGKILMMNNRKKHKNNDDAAPVVDYYINYDHVEHHHNHNHNSQRCSSPTQLIPNLVLQGDSSSLFRFASSSLDGNANKTRLFERKL 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00293 322 MobiDBLite consensus disorder prediction 130 149 - -
Arst10g00293 322 Gene3D NAC domain 67 220 IPR036093 GO:0003677|GO:0006355
Arst10g00293 322 Pfam No apical meristem (NAM) protein 58 197 IPR003441 GO:0003677|GO:0006355
Arst10g00293 322 FunFam NAC domain-containing protein 73 66 220 - -
Arst10g00293 322 SUPERFAMILY NAC domain 52 216 IPR036093 GO:0003677|GO:0006355
Arst10g00293 322 ProSiteProfiles NAC domain profile. 57 216 IPR003441 GO:0003677|GO:0006355
Arst10g00293 322 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 15 284 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00293 Arst-Chr10 2496372 2499874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00293 1 237 NAC Transcription Factor Family AT4G28500 66.122 8.15e-116 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst10g00293 NAM 9.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00293 - - gmx:100795920 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00293 10 2496372 2499874 Arst10g00293 10 2496372 2499874 ECH
Arst10g00293 10 2496372 2499874 Arst3g01929 3 22625035 22629492 ECH