Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00287 ATGGAGATGAAACAAATGCAGAGTGCTGAAGAGTTGTTTCAAGCTCAATCCCATTTATACAGCTATACATACCATTTCATTGGGTCTATGTGCCTCAAAAGTGCAGTTCATTTGGGAATACCAGACATAATCCACAAGCATGGTCAACCCATTACACTTAATGAGTTGGTCTTGGCACTTCAAATTGACCCTAACAAATCCGGATATGTGTATAGGCTCATGCGGTTCTTGGTGCATTCTGGATTCTTTGTTACAACCAAGATTGATGGTGGAAAAGAAGAAGAAGAAGAAGAAATAATGGGGTATGATCTTACACCTTCCTCAAGGCTCCTCCTCAAAGACACTGTCCCAACTCTCTCTCCTTTTGTTCAAGCAATGTTTCATCCTGCTATACTTCACCCTCCTGAGTTCTTGGCAGAATGGTTCCACACAAATGAACCTACACCCTTTCACACTGCACATGGCAAAAGCTTTTGGGACTATTTAAGCCAAAACCAAGAGTTTAATGGCCTCTTCAATGAAGCAATGATCAGTGATTCTGGAATGATGAATTTGGTGATCAAAGATTGCAAGCCTGTTTTTGAGGGGATGAGTTTATTGGTTGATGTTGGCGGCGGAAAAGGCGCCGTGGCTAGGTTGCTTTCTGAATCTCTGCCTCATTTGCAATGCATAGTACTTGATCTTCCACACGTTGTTGAAAATTCACAAGATTGCAATAACTTGAAATTTGTTGGAGGTGACATGTTTCAATCTATTCCTTCAGCTGATGCAATTCTTCTTAAGTTAGTTTTGCATGCTTATAGTGATGAAGATTGCATTAAGGTACTGAAGATGTGTAGAGAAGCTATTTCAAGCAAAGGTAAGGAAGGGAAAGTAATAATCATAGACATAGTGATCAATGAGAAGAATGATAAGCGTGAATTGACAGAATCAAAGCTCCTCTTTGATCTGCTAATGATGAGTGTGGTCACTGGAAAAGAGAGGGAAGAAAAAGAATGGAAGAAGCTCTTCTTGGAAGCTGGATTCAGTCACTACAAGATAACACCCATATTTGGTATGAGGTCACTCATTGAAGTTTATCCTTGA 1086 0.4006 MEMKQMQSAEELFQAQSHLYSYTYHFIGSMCLKSAVHLGIPDIIHKHGQPITLNELVLALQIDPNKSGYVYRLMRFLVHSGFFVTTKIDGGKEEEEEEIMGYDLTPSSRLLLKDTVPTLSPFVQAMFHPAILHPPEFLAEWFHTNEPTPFHTAHGKSFWDYLSQNQEFNGLFNEAMISDSGMMNLVIKDCKPVFEGMSLLVDVGGGKGAVARLLSESLPHLQCIVLDLPHVVENSQDCNNLKFVGGDMFQSIPSADAILLKLVLHAYSDEDCIKVLKMCREAISSKGKEGKVIIIDIVINEKNDKRELTESKLLFDLLMMSVVTGKEREEKEWKKLFLEAGFSHYKITPIFGMRSLIEVYP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00287 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 360 IPR029063 -
Arst10g00287 361 PANTHER O-METHYLTRANSFERASE 11 346 IPR016461 GO:0008168
Arst10g00287 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 361 IPR016461 GO:0008168
Arst10g00287 361 FunFam O-methyltransferase ZRP4 113 361 - -
Arst10g00287 361 Pfam O-methyltransferase domain 138 343 IPR001077 GO:0008171
Arst10g00287 361 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Arst10g00287 361 Gene3D Vaccinia Virus protein VP39 113 361 IPR029063 -
Arst10g00287 361 Gene3D - 2 111 IPR036388 -
Arst10g00287 361 FunFam Coniferyl alcohol 9-O-methyltransferase 2 111 - -
Arst10g00287 361 PIRSF O-mtase 1 361 IPR016461 GO:0008168
Arst10g00287 361 SUPERFAMILY "Winged helix" DNA-binding domain 9 114 IPR036390 -
Arst10g00287 361 CDD AdoMet_MTases 200 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00287 Arst-Chr10 2406346 2407814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00287 30 359 Monolignol Biosynthesis Gene Families AT5G54160 32.059 8.57e-45 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00287 K22588 - qsu:112018723 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00287 10 2406346 2407814 Arst10g00287 10 2406346 2407814 ECH