Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00280 ATGGAACATCATAACAAGTTGTTTCTTCTACTCATGCTTCTTATTCAAGTTCTGCTTGTAGCAGCACAAACAAACAGCCAAGACTATAATGGCTTAGCAGCTCTTACAGGATTCTGGACTAACAGACCACCAAATTGGGTTGGTACAGATCCTTGTGGCAGTAATTGGGAAGGAATTCGTTGCTCCAACTCAAGGATTACAGAATTGAAACTGTTAAGCATGAATTTGGAGGGACAACTGTCTTCAGCAATCCAACAATTACCTGAACTAGACACATTGGATCTTTCTTACAACACTGGCTTGACAGGAACGATTCCACAAGAAATTGGGAGTTTGAAGAAGCTAAAATCCCTCGCCTTGGTTGGTTGTGGTCTCTCTGGTCCTATACCAGACTCTATTGGAGCTTTGAAGCAACTAACCTTTCTAGCACTTAATATGAATCGGTTCAACGGAACAATTCCGGGCTCCATTGGCAATCTGACTAATATCAATTGGCTTGATGTTGCTGATAATCAACTTGAAGGACAACTTCCTGTATCTGATAACAAAGGAACACCAGGACTTGACCTGCTCCTTCAGGCCCAACACTTTCATATGGGGAACAATAAGTTCTCTGGTCAATTACCAGAAAAACTATTCAATTCAAAAATGCTACTAAAACATGTGCTTTTGGACAACAATCAACTGCAGGGTAGTATTCCTAGCTCCCTTGGTCAAGTGAGCACATTGGAGGTGTTGCGCTTAGATACAAATGGATTTAGCGGAGCAGTGCCTTCAACTTTAAAGAATCTTGGACAGCTGAGTGAGCTGTATTTATCCCATAATAAGCTGAATGGCTCTCTGCCAGACCTTACCGGATTGAACAGTCTCTCCTATGTGGATATGAGCAACAATTCTTTCAACGATTCTGATATTCCATTATGGGTTTCAAGTTTGCAATCTCTGACAACTGTGCTACTAGGGGACAACCAGCTGAGTGGCACATTGAATCTTACCAGTGGCTACAGTAACAGTCTGCAGCTCATTGATTTGCAGGATAATCAAATAACCGATTACAAGCCAGGAAGCAAAAAGATAAATTTCCAAGTGGTGTTAGCTGGTAATCCAATTTGTCATGAATCTGAAGCTCAAAAACTGAGTTACTGCCAACTGCCCCTACAAACTCCTGCATACACAACACCACTAAATAATTGCTCCGCTCAATCCTGCTCTTCTGGTCAGGTTTCCAGCCCAAATTGTAAATGTGCATATCCCTATACTGGAACACTCTACTCCAGAGCTCTTAGTTTCACAACCCTTAACGATACTGATTACAAGGAGCTTGAGCAGTCTTTGTTGAAGAGCTTTGAGTCCCAAAAGCTTCCTGTGGATTCAGTTTCTCTGAGTAATCCCTCAAGGAATGCATCTAACAACAATTTTCAGTTGACTCTGGATGTCTTCCCATCTCAAACTGATCGTTTCAATAGAACTGGAGTTTCAAGTGTTGCTTTTGTGCTAAGTAACCAAATTTTCAAGGCCCCGGAATTTTTCTCCCCTTACTTCTTCAATGGTCTCAACTATCAATACTATGGAGGAGAACCTAAATCAAAGTCAAAGCATACTGGAGCTATAATTGGTGCAGTAGTTGCTGTTGTGGTGTTTCTTGGATTAGCATTCGTCATAGGCATGTATGCCCTCCGCCAGAAAAGAAGAGCAGAAAGATCTGAGCTCAATCCTTTTGCAAATTGGGAACAGAACCCGAATAGTGGAGCTGCTCCTCAGTTGAAAGGAGCGCGATGGTTTTCTTTCGAAGATCTGAGGAAATACACCAACAACTTCTCAGAAAGTAATACTATTGGAAGTGGGGGCTATGGAAAGGTGTACCAAGGTGTTCTTCCTGCTGGGGAAGTGGTTGCCATCAAGCGGGCTGCACAAGAATCTATGCAAGGTGCTGTTGAGTTTAAAACTGAGATTGAACTTCTTTCAAGGGTCCACCATAAGAATCTTGTTAGTCTTGTGGGTTTCTGCTTTGAGAAGGGTGAACAAATGCTGGTGTACGAGTATGTTCCAAATGGTACTATAATGGATAGTCTTACAGGAAAGTCTGGGATATCCATGGATTGGATACGGAGGCTGAAAGTCGCGTTGGGCGCAGCGAGGGGTCTGGCATATCTTCATGAACTTGCTAACCCACCAATCATACACAGAGACATAAAATCAAGCAATATCCTACTTGATAGTCACCTTAATGCAAAAGTGGCTGATTTTGGTCTCTCAAAACTTCTTGTAGATAGTGAAAGGGGCCATGTCACTACTCAAGTCAAAGGGACAATGGGATACTTGGATCCTGAATATTACATGAGCCAGCAATTGACCGAAAAGAGCGATGTATATAGCTTTGGAGTGGTGATGCTTGAGCTAGTAACAGCGAAAAGGCCAATAGAGCAAGGGAAGTATATTGTGAGAGAGGTAATGAGGGTAATGGATACATCAAAAGACTTGTACAATCTTCACTCTATTGTTGATCCAACCATAGTCAGCAGCACAAGTCCAAAGGGGTTAGAGAAGTTTGTTGAAGTGGCAATGAGGTGTGTGAAAGAATATGCATCTGAGAGGCCTTCCATGGCTGAGGTTGTGAAAGAGATTGAGAACATAATCCAGCTTGCTGGTTTGAACCCCAGTGTTGAATCAGCTTCCACCACAGAAAGCTATGAGGTGCCACTTGGGCAAAATGTCAAACACCTTTATGACAATGAAGATTTTAGCCATTCTGGAAACTTCCCAACAGCAAAGATAGAACCTCAATGA 2787 0.423 MEHHNKLFLLLMLLIQVLLVAAQTNSQDYNGLAALTGFWTNRPPNWVGTDPCGSNWEGIRCSNSRITELKLLSMNLEGQLSSAIQQLPELDTLDLSYNTGLTGTIPQEIGSLKKLKSLALVGCGLSGPIPDSIGALKQLTFLALNMNRFNGTIPGSIGNLTNINWLDVADNQLEGQLPVSDNKGTPGLDLLLQAQHFHMGNNKFSGQLPEKLFNSKMLLKHVLLDNNQLQGSIPSSLGQVSTLEVLRLDTNGFSGAVPSTLKNLGQLSELYLSHNKLNGSLPDLTGLNSLSYVDMSNNSFNDSDIPLWVSSLQSLTTVLLGDNQLSGTLNLTSGYSNSLQLIDLQDNQITDYKPGSKKINFQVVLAGNPICHESEAQKLSYCQLPLQTPAYTTPLNNCSAQSCSSGQVSSPNCKCAYPYTGTLYSRALSFTTLNDTDYKELEQSLLKSFESQKLPVDSVSLSNPSRNASNNNFQLTLDVFPSQTDRFNRTGVSSVAFVLSNQIFKAPEFFSPYFFNGLNYQYYGGEPKSKSKHTGAIIGAVVAVVVFLGLAFVIGMYALRQKRRAERSELNPFANWEQNPNSGAAPQLKGARWFSFEDLRKYTNNFSESNTIGSGGYGKVYQGVLPAGEVVAIKRAAQESMQGAVEFKTEIELLSRVHHKNLVSLVGFCFEKGEQMLVYEYVPNGTIMDSLTGKSGISMDWIRRLKVALGAARGLAYLHELANPPIIHRDIKSSNILLDSHLNAKVADFGLSKLLVDSERGHVTTQVKGTMGYLDPEYYMSQQLTEKSDVYSFGVVMLELVTAKRPIEQGKYIVREVMRVMDTSKDLYNLHSIVDPTIVSSTSPKGLEKFVEVAMRCVKEYASERPSMAEVVKEIENIIQLAGLNPSVESASTTESYEVPLGQNVKHLYDNEDFSHSGNFPTAKIEPQ 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00280 928 Gene3D Ribonuclease Inhibitor 183 411 IPR032675 -
Arst10g00280 928 FunFam Leucine-rich repeat family protein 27 182 - -
Arst10g00280 928 Gene3D Phosphorylase Kinase; domain 1 577 681 - -
Arst10g00280 928 ProSiteProfiles Protein kinase domain profile. 606 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00280 928 PANTHER RECEPTOR-LIKE PROTEIN 55 37 878 - -
Arst10g00280 928 CDD STKc_IRAK 612 878 - -
Arst10g00280 928 Gene3D Transferase(Phosphotransferase) domain 1 682 892 - -
Arst10g00280 928 SUPERFAMILY Protein kinase-like (PK-like) 592 899 IPR011009 -
Arst10g00280 928 SMART serkin_6 606 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00280 928 ProSitePatterns Protein kinases ATP-binding region signature. 612 634 IPR017441 GO:0005524
Arst10g00280 928 ProSitePatterns Serine/Threonine protein kinases active-site signature. 726 738 IPR008271 GO:0004672|GO:0006468
Arst10g00280 928 Pfam Leucine rich repeat 242 299 IPR001611 GO:0005515
Arst10g00280 928 ProSiteProfiles Leucine-rich repeat profile. 266 288 IPR001611 GO:0005515
Arst10g00280 928 FunFam Leucine-rich repeat protein kinase family protein 573 681 - -
Arst10g00280 928 Pfam Protein kinase domain 607 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00280 928 Gene3D Ribonuclease Inhibitor 30 182 IPR032675 -
Arst10g00280 928 FunFam Leucine-rich repeat protein kinase family protein 184 283 - -
Arst10g00280 928 SUPERFAMILY L domain-like 40 372 - -
Arst10g00280 928 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 682 891 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00280 Arst-Chr10 2370586 2376547 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00280 8 928 Receptor kinase-like Gene Family AT5G49760 52.947 0.0 941
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Arst10g00280 Pkinase 6.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00280 - - gmx:100786172 1350.5