Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00258 ATGGTGTTTGGTTTTTCCTTGCAGGAGACTGACATTGGGAGGCACGTGAATCAGTTGCGGAAGCATTCCTCCAATGGCGTTCGCAGATTGGTGAAGCTACTTGTGAGGAAGTGGAAGGAAATTGTGGATGAGTGGGTGAGGTTGAATCAATCGGGTGGAACAGCTTCTCTCATGGCTGATGGGGACTCTCCACAGCTGAAAATCACCCAAAACGGGCATCATCAGCTCTTTCTTGGACCCTTATTTTTATTTTTATTTTTTATATCATGGTAA 273 0.4505 MVFGFSLQETDIGRHVNQLRKHSSNGVRRLVKLLVRKWKEIVDEWVRLNQSGGTASLMADGDSPQLKITQNGHHQLFLGPLFLFLFFISW 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00258 90 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 7 76 IPR044790 -
Arst10g00258 90 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 5 54 IPR035441 -
Arst10g00258 90 ProSiteProfiles TFIIS N-terminal domain profile. 1 45 IPR017923 -
Arst10g00258 90 Pfam TFIIS helical bundle-like domain 7 42 IPR017923 -
Arst10g00258 90 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 7 52 IPR035441 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00258 Arst-Chr10 2236560 2237076 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Arst10g00258 Med26 3.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00258 - - aip:110265468 145.591