Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00257 ATGGTGTTTGGTTTTTCCTTGCAGGAGACTGACATTGGGAGGCACGTGAATCAGTTGCGGAAGCATTCCTCCAATGGCGTTCGCAGATTGGTGAAGCTACTTGTGAGGAAGTGGAAGGAAATTGTGGATGAGTGGGTGAGGTTGAATCAATCGGGTGGAACAGCTTCTCTCATGGCTGATGGGGACTCTCCACAGCTGAAAATCACCCAAAACGGGCATCATCAGCTCTTTCTTGGACCCTTATTTTTATTTTTATTTTTTATATCATGA 270 0.4519 MVFGFSLQETDIGRHVNQLRKHSSNGVRRLVKLLVRKWKEIVDEWVRLNQSGGTASLMADGDSPQLKITQNGHHQLFLGPLFLFLFFIS 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00257 89 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 5 54 IPR035441 -
Arst10g00257 89 Pfam TFIIS helical bundle-like domain 7 42 IPR017923 -
Arst10g00257 89 ProSiteProfiles TFIIS N-terminal domain profile. 1 45 IPR017923 -
Arst10g00257 89 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 7 76 IPR044790 -
Arst10g00257 89 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 7 52 IPR035441 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00257 Arst-Chr10 2236560 2237258 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Arst10g00257 Med26 3.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00257 - - aip:110265468 145.591