Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00234 ATGCATACTCCTCCTCCTCCATCATCATCATCATCATCTTCTTCTTCTTCTAATTCTATTTGGGTATTGTCTAGCATAAAGCTTCAATTCTTTGCACGAATCAGAAGGTTCCTCCAATCAAAAGCGACACGAAAGCGCCGAAACCAATCAAGAAACAGAGCTGAGCAGAGCAACAACGACAATAACAAGGTCGAAAAAGTTGTTGAAACGGTTCAAGTCATGGAGAAGCATGAGGAGGAGAAGGAAGAAGAGGAGGACTCTGCTATCATATTGCAGAGGACAGTGAAGAAGCTTCACTTTGGAAGCTGTGAAGAGAAGGAGGTGGCAGCCAAGGATATTGGAAATTTGGCAAAAGAAGATTTGAAGGTTAGAAAGTTGATAACAGAACTCGGTGTGGTGCCTGTGTTGGTCTCTATGGTGGCTTCCGACGTGGCCACCCGTCGCAGAGCGGCGTTGGTGGCGTTGATCCACCTTGCTGATGGAACTTACACGAACAAGGCTATGATAGTGGAGGCAGGAATATTATCCAAGCTGCCAAACACAGTTGACAATGTAGATGAATCAACAATCAATGAATTTTCTGAGTTGCTGTTATCGTTGTCTTCACTAGCAAACACCCAATTCCATTTTCCTTCATTGGACTTTCTACCATCACTAAGACACATTCTTGAGTCAAACTCATCAAGCTTAGACACAAAAACATCATGTTTGGGTGCCCTATACAACTTTTCAAGCGTGTTAGAGAACGCGGGAGCTTTGGTTTCATGTGGGATTGTTCCTATTTTATTAGAACTATCCTCAAGAAAAGAAACTTCAGAGAAAGCATTGGCAAGTCTAGGGAACTTGTTAGTGAGCATGATGGGGAAGAAAGCAATAGAGAATAGTTGTTTAGTGCCAAAGAACTTCATTGAGATCTTGTCATGGGAAGACAAACCGAAATGCCAAGAGTTATCGGTTTATATATTGATGATCCTAGCGCATCAAAGTTCAAGTCAAAGGGAGAAAATGGCAGAGGCTGGCATTGTTCCTGTGCTTCTTGAAGTGGTTCTGTTGGGAAGCTCTTTGGCTCAGAAGAGAGCATTGAAGCTATTGCAATGGTTCAAGGATGAGAGGCAAACCAAGATGGGGCCACATTCGGGGCCACAAACACCGAGGTTTGCATCGATGGGGTCACCGGTGAATCAAAGAGAAGCAATGGAAGGGAAGAAGATGATGAAGAGTTTGGTTAAACAAAGCTTGCATAGGAACATGGAGATTATTACTCACAGGGCTAATGCTGCTGGAGACTCTTCTAGATTTAAGTCATTGGTTATTAGCACGAGTTCTAAGAGTTTGCCTTATTAA 1344 0.4301 MHTPPPPSSSSSSSSSSNSIWVLSSIKLQFFARIRRFLQSKATRKRRNQSRNRAEQSNNDNNKVEKVVETVQVMEKHEEEKEEEEDSAIILQRTVKKLHFGSCEEKEVAAKDIGNLAKEDLKVRKLITELGVVPVLVSMVASDVATRRRAALVALIHLADGTYTNKAMIVEAGILSKLPNTVDNVDESTINEFSELLLSLSSLANTQFHFPSLDFLPSLRHILESNSSSLDTKTSCLGALYNFSSVLENAGALVSCGIVPILLELSSRKETSEKALASLGNLLVSMMGKKAIENSCLVPKNFIEILSWEDKPKCQELSVYILMILAHQSSSQREKMAEAGIVPVLLEVVLLGSSLAQKRALKLLQWFKDERQTKMGPHSGPQTPRFASMGSPVNQREAMEGKKMMKSLVKQSLHRNMEIITHRANAAGDSSRFKSLVISTSSKSLPY 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00234 447 MobiDBLite consensus disorder prediction 373 392 - -
Arst10g00234 447 Gene3D - 55 422 IPR011989 -
Arst10g00234 447 MobiDBLite consensus disorder prediction 42 64 - -
Arst10g00234 447 Coils Coil 47 94 - -
Arst10g00234 447 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 22 447 - -
Arst10g00234 447 MobiDBLite consensus disorder prediction 376 390 - -
Arst10g00234 447 SUPERFAMILY ARM repeat 96 367 IPR016024 -
Arst10g00234 447 SMART arm_5 120 160 IPR000225 GO:0005515
Arst10g00234 447 SMART arm_5 162 202 IPR000225 GO:0005515
Arst10g00234 447 SMART arm_5 245 284 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00234 Arst-Chr10 2080326 2084276 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00234 104 384 U-box Gene Family AT1G67530 27.778 3.43e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00234 - - adu:107468248 776.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00234 10 2080326 2084276 Arst10g00234 10 2080326 2084276 ECH