Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00210 ATGTCTAAAGAATATGCGGATGAGATTATTATTGAAGAAGATGAGGAAACTTCTTCACTGGGATGTTGTTCCCAGAAATGCTCTTCATTTGATTTGAATGAAGAAGCAAGCAGTGAAGAAGAAGAAGAAGAAGGAGGTAAGAATAAGAAGGAGGAGGATGAGGCAGCATGTGATGAAGAGGAGATCAATGCGAATGGAACATCAAACTCAAGAGAAGATGAAGGAAATAATAACAACAAAAACAATGAGAGAAGAGGTGGAGTTAGGCAATATGTTAGATCCAAGATGCCAAGGCTTCGATGGACTCCTGAGCTTCATCTCTCTTTTGTTCATGCTGTTGAAAGACTTGGCGGTCAAGAGAGAGCAACACCCAAGTTGGTGCTTCAGTTGATGAATGTGAGAGGGCTCAGCATTGCTCATGTCAAGAGTCACTTGCAGATGTATCGTAGCAAGAAACTTGACGAGACCGGCCAAGTATTAGGTCAAACATACAGATCGAGGCAATTGCATGAAGTAGTGGGACGTAGTAGAAATCATCATGAGTTACTCAATCCTCATCACCATTTCAAGATGGGAAACGGTGGCATTATTCTTGCAACCAATTTCAACCATCATCATCATTTCCAAGGTTCTCTGATGCCCCATCACCACCACCCCCACTTCTCCCTTTCATCACGTTCACATGCAATCGCCACCGACTCAGGGCAACATGAATTGTATTTGAATCATCAAGGATTGAGAGTAACAAGCAACGAAATTGTGTCCTCATCAAGTAATCATCAAGGAAGATCGAGTTCAAACCAGGTTCAAGTGATGGATACGTCTTGCAGAATTGCACCAATTAGACCAAGTCATTTCCTTGAAGAGAAGAAGTGGCCTCCCTTGGAAATTATGAACAATCATCATCAATGGAAGTTCAAGGGTCCTACTACTATTGGCAACATTCCTGAATCTGTTCAGCCAAGTATCAGAGAGTATTTATCAACCTCCAAGAATAATTTAAGGCTAGAATTTGATCCTCCATTTCGGATAAAGTTGAATGAAGTGAAGAGGGAGAAAAGGGAGGAAAGGTTGCCCAATTTGCAACTAGGTTTGAGTCATGGCGGAGATGGAAGTGATGATGATTGCAGAGAAACACAAGAGATCAGCACTAAGCTTTCACTTTCATAG 1170 0.4171 MSKEYADEIIIEEDEETSSLGCCSQKCSSFDLNEEASSEEEEEEGGKNKKEEDEAACDEEEINANGTSNSREDEGNNNNKNNERRGGVRQYVRSKMPRLRWTPELHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDETGQVLGQTYRSRQLHEVVGRSRNHHELLNPHHHFKMGNGGIILATNFNHHHHFQGSLMPHHHHPHFSLSSRSHAIATDSGQHELYLNHQGLRVTSNEIVSSSSNHQGRSSSNQVQVMDTSCRIAPIRPSHFLEEKKWPPLEIMNNHHQWKFKGPTTIGNIPESVQPSIREYLSTSKNNLRLEFDPPFRIKLNEVKREKREERLPNLQLGLSHGGDGSDDDCRETQEISTKLSLS 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00210 389 Pfam Myb-like DNA-binding domain 99 149 IPR001005 -
Arst10g00210 389 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 73 227 IPR046955 GO:0003700
Arst10g00210 389 SUPERFAMILY Homeodomain-like 95 151 IPR009057 -
Arst10g00210 389 MobiDBLite consensus disorder prediction 357 389 - -
Arst10g00210 389 Gene3D - 96 153 - -
Arst10g00210 389 MobiDBLite consensus disorder prediction 1 91 - -
Arst10g00210 389 NCBIfam myb-like DNA-binding domain, SHAQKYF class 97 152 IPR006447 GO:0003677
Arst10g00210 389 FunFam Myb family transcription factor 95 153 - -
Arst10g00210 389 MobiDBLite consensus disorder prediction 18 32 - -
Arst10g00210 389 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 93 153 IPR017930 -
Arst10g00210 389 MobiDBLite consensus disorder prediction 76 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00210 Arst-Chr10 1894472 1899695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00210 88 158 G2-like Transcription Factor Family AT2G42660 77.465 1.10e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst10g00210 Myb_DNA-binding 2.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00210 - - adu:107468251 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00210 10 1894472 1899695 Arst10g00210 10 1894472 1899695 ECH