LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst10g00193	ATGGAAGGTGTCAAGTTGGTTGCTTGGTTCTTCTCCTTGTTTATTTTGTGTTCGATGCCAATGGTTGTTGAGGGCACTGATAGCCTTCTCTCTCCAAAGGGTGTCAACTATGAAGTTGCTGCTTTGATGTCCATGAAGAATAAAATGAACGATGAATTGCACGTCTTGAATGGCTGGGATATTAATTCGGTTGACCCTTGCACTTGGAACATGGTTGGTTGCTCTGCTGAAGGTTATGTCATTTCCCTGGAAATGGCCAGTGCTGGTTTATCTGGAACTCTTTCGTCAGGAATTGGAAATTTGAGCCATCTCCGAACATTGTTACTGCAGAACAATCAGTTATCTGGTCCTATCCCGGCTGAGATAGGCAAGTTGTCAGAGCTTCAAACTCTAGACCTTTCCGGTAACCAGTTTGTTGGAGAAATTCCTAGTTCTTTGGGCTTATTGTCTCAACTAAGTTACTTGCGGCTCAGCAAAAATAATCTATCTGGACAGATCCCTCCACTTGTTGCTAACTTGACAGGCCTTTCATTCTTGGACTTGTCATTCAATAATCTCAGTGGTCCCACTCCAAAAATTTTGGCAAAAGGTTACAGTATTTCAGGAAATAACTTCCTTTGTACATCTCCTTCGGAACATTGTATGGACATTTCAAAACCACTAAACGGATCATCTCAGAAAGTCAAGAGTCATCACCAAAGGGTGATTTCTGTTGTTGTTGGCATCAGTTGCACATTTATAATTTCAGTGATGCTTGTGTGTTGGTTGCATTGGTACAGATCGCGCATACTCTATACATCTTATGTGGAGCAAGATTGTGAATTTGATATTGGCCATTTGAAGAGGTTCACCTTCCGTGAACTACAAATTGCTACTGGAAATTTCAGTCAAAAGAACATCCTTGGACAAGGAGGCTTTGGCATTGTCTACAAAGGATGCCTTACAAACAAAATGCTGGTGGCAGTGAAGAGGCTGAAAGATCCCAATTACACTGGAGAAATGCAATTTCAAACTGAAGTTGAGATGATCGGCTTGGCCGTGCATCGTAACCTCTTGCGTCTCTATGGATTTTGTATGACTCCAGATGAAAGGTTACTTGTTTATCCTTACATGCCTAATGGCAGTGTTGCTGATCGCTTGAGAGACACGTGCCGAGAAAAGCCATCTCTGGATTGGAACAGGCGAATGCGAGTTGCTGTTGGCGCTGCACGCGGGCTTCTGTATTTACACGAGCAGTGCAATCCTAAAATAATCCACAGGGATGTTAAGGCTGCAAACATTTTGCTAGATGAAAGTTTTGAAGCTGTGGTGGGGGATTTTGGCCTTGCTAAGCTGTTGGATCAAAGGGATTCGCATGTCACTACCGCCGTGCGAGGTACAGTAGGCCACATTGCCCCGGAGTATCTCTCCACTGGACAGTCTTCTGAGAAAACAGATGTTTTTGGATTTGGCATATTACTTCTGGAGCTCATAACAGGACAAAAGGCACTAGATGCTGGGAATGGTCAAGTACAAAAGGGAATGATTCTTGATTGGGTTAAGACATTATTTGAGGAGAAGCGGCTAGAAGTGTTAGTTGATAGGGATCTAAGGGGATGCTTTGATCCAGTTGAGTTAGAAATGGCAGTGGAGTTGTCTTTACAGTGCACTCAGTCACTTCCGAGTCTGCGGCCGAAGATGTCGGAAGTCTTGAAGATTCTAGAAGGCCTGGTTGGGCAGCCGGCGCCGCCGGAGGAGTCACAAGGAGGGTCTAACTTATATGAAGAAAGAGCATGCAGTTTCTCCCAAAATTATAGTGATGTTCATGAAGAACCTTCCTTTGTTATTGAAGCCATTGAGCTTTCTGGTCCTCGGTGA	1857	0.4394	MEGVKLVAWFFSLFILCSMPMVVEGTDSLLSPKGVNYEVAALMSMKNKMNDELHVLNGWDINSVDPCTWNMVGCSAEGYVISLEMASAGLSGTLSSGIGNLSHLRTLLLQNNQLSGPIPAEIGKLSELQTLDLSGNQFVGEIPSSLGLLSQLSYLRLSKNNLSGQIPPLVANLTGLSFLDLSFNNLSGPTPKILAKGYSISGNNFLCTSPSEHCMDISKPLNGSSQKVKSHHQRVISVVVGISCTFIISVMLVCWLHWYRSRILYTSYVEQDCEFDIGHLKRFTFRELQIATGNFSQKNILGQGGFGIVYKGCLTNKMLVAVKRLKDPNYTGEMQFQTEVEMIGLAVHRNLLRLYGFCMTPDERLLVYPYMPNGSVADRLRDTCREKPSLDWNRRMRVAVGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDQRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALDAGNGQVQKGMILDWVKTLFEEKRLEVLVDRDLRGCFDPVELEMAVELSLQCTQSLPSLRPKMSEVLKILEGLVGQPAPPEESQGGSNLYEERACSFSQNYSDVHEEPSFVIEAIELSGPR	618

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst10g00193	618	SMART	serkin_6	295	566	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst10g00193	618	SUPERFAMILY	L domain-like	37	209	-	-
	Arst10g00193	618	SMART	LRR_typ_2	101	124	IPR003591	-
	Arst10g00193	618	SMART	LRR_typ_2	173	196	IPR003591	-
	Arst10g00193	618	SMART	LRR_typ_2	125	149	IPR003591	-
	Arst10g00193	618	ProSiteProfiles	Protein kinase domain profile.	295	571	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst10g00193	618	FunFam	Somatic embryogenesis receptor-like kinase 1	371	579	-	-
	Arst10g00193	618	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	35	216	-	-
	Arst10g00193	618	Gene3D	Transferase(Phosphotransferase) domain 1	371	572	-	-
	Arst10g00193	618	PANTHER	SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1	7	566	-	-
	Arst10g00193	618	Gene3D	Phosphorylase Kinase; domain 1	265	370	-	-
	Arst10g00193	618	ProSitePatterns	Protein kinases ATP-binding region signature.	301	323	IPR017441	GO:0005524
	Arst10g00193	618	Gene3D	Ribonuclease Inhibitor	35	216	IPR032675	-
	Arst10g00193	618	SUPERFAMILY	Protein kinase-like (PK-like)	279	579	IPR011009	-
	Arst10g00193	618	Pfam	Protein kinase domain	296	565	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst10g00193	618	FunFam	Somatic embryogenesis receptor kinase 1	265	370	-	-
	Arst10g00193	618	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	417	429	IPR008271	GO:0004672\|GO:0006468
	Arst10g00193	618	Pfam	Leucine rich repeat N-terminal domain	36	75	IPR013210	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst10g00193	Arst-Chr10	1792262	1796147	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst10g00193	43	618	Receptor kinase-like Gene Family	AT5G45780	73.150	0.0	828

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-II	Arst10g00193		Pkinase	8.5e-44	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst10g00193	-		-	gmx:100810610	1071.23