Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00174 ATGGGTGGGTGTTTTCCTTGTTTTGGATCATCCAACAAGGAGGAAAGTGGTGGTGGTGGGTTGAAGAAGGAAGTGGCAAAAAAGGAATCTTTCAAGGAATCGTCAGCTCCTCAGGTTCATCACCCCAGCAGGGTTAGCTCAGATAAATCAAAGTCACGTTGTAGCTCAGATCCTAAGAAGGAAACACCAGTTCCGAAGGATGGGCCAACTGCTCATATTGCTGCTCAAACATTTACATTCCGAGAGCTTGCAGCTGCTACAAAGAATTTTAGGCCAGAATGTTTACTTGGGGAAGGAGGTTTTGGGCGCGTTTACAAGGGTCGGCTTGAGAACACAGGACAGGTAGTTGCTGTAAAGCAACTTGATCGAAATGGTCTTCAAGGGAATCGGGAGTTTTTGGTGGAGGTTCTCATGCTTAGTCTCTTACATCACCCTAATCTGGTGAACTTAATCGGTTATTGTGCTGATGGTGATCAGCGGCTCCTTGTTTATGAATTCATGCCATTGGGATCTTTGGAGGATCATTTACATGATCTCCCTCCTGACAAGGAGCCTCTGGACTGGAACACTAGGATGAAAATAGCAGCTGGTGCAGCAAAGGGATTGGAATATTTGCATGACAAGGCAAACCCCCCTGTGATATATAGAGACTTAAAATCTTCTAACATCCTGCTAGATGAGGGTTATCATCCCAAGTTATCGGATTTTGGACTAGCTAAACTTGGTCCTGTTGGTGACAAGACACATGTATCCACACGAGTAATGGGAACATATGGTTATTGTGCACCAGAATATGCTATGACTGGTCAACTCACTCTGAAGTCCGATGTTTACAGCTTTGGAGTTGTGTTCCTTGAACTTATTACGGGGCGCAAGGCTATTGACAATACACGTGCACATGGAGAGCATAATCTTGTTGCTTGGGCTCGGCCTCTTTTCAAAGATCGTAGAAAGTTCCCCAAAATGGCTGATCCTCTACTCCAAGGCCGATATCCAATGCGAGGACTGTACCAAGCACTGGCAGTTGCAGCAATGTGCTTGCAGGAACAAGCTGCCACAAGGCCTCTTATTGGGGATGTCGTAACTGCTCTCACATATCTGGCCTCCCAGACATATGAACCAAATGTAGCCAATCAGTCCAACAGACTCGGTCCATCTACCCCCCGGAGCAGGGATGACAGAAGGAGCATGATAGATGGTGTGGATAGCCCAGACCGGGGGCGTCTCGGCTCCCCTTCCACCCACAGAAACTCACCTGATTACAGGAGGAGAGACAATAGGGAACTGAGTGTTGGGACAGAGTTAGGCAGGAGTGTCTCTGGCAGCGGTGGGTCGGGGAGGAAATGGGGACTGGATGATTTAGAAAGGCAAGATTCTCGTAGAGACAGCCCTGTAAATACTGCAAGAGCTAGGGAGACGCCAAGGAACCGTGACCTAGACAGGGAACGCGCTGTTGCAGAAGCGAAAGTATGGGGTGAGAATTGGAGGGAAAAGAAGAGAGCAAATGCCATGGGAAGCTTTGATGCCACAAATGAGTGA 1539 0.4789 MGGCFPCFGSSNKEESGGGGLKKEVAKKESFKESSAPQVHHPSRVSSDKSKSRCSSDPKKETPVPKDGPTAHIAAQTFTFRELAAATKNFRPECLLGEGGFGRVYKGRLENTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRAHGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYEPNVANQSNRLGPSTPRSRDDRRSMIDGVDSPDRGRLGSPSTHRNSPDYRRRDNRELSVGTELGRSVSGSGGSGRKWGLDDLERQDSRRDSPVNTARARETPRNRDLDRERAVAEAKVWGENWREKKRANAMGSFDATNE 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00174 512 PANTHER OS07G0668900 PROTEIN 4 376 - -
Arst10g00174 512 ProSiteProfiles Protein kinase domain profile. 90 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00174 512 MobiDBLite consensus disorder prediction 417 431 - -
Arst10g00174 512 MobiDBLite consensus disorder prediction 387 402 - -
Arst10g00174 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Arst10g00174 512 FunFam Serine/threonine-protein kinase PBS1 167 382 - -
Arst10g00174 512 MobiDBLite consensus disorder prediction 376 483 - -
Arst10g00174 512 ProSitePatterns Protein kinases ATP-binding region signature. 96 119 IPR017441 GO:0005524
Arst10g00174 512 Gene3D Phosphorylase Kinase; domain 1 74 166 - -
Arst10g00174 512 MobiDBLite consensus disorder prediction 17 35 - -
Arst10g00174 512 FunFam Serine/threonine-protein kinase PBS1 63 166 - -
Arst10g00174 512 SUPERFAMILY Protein kinase-like (PK-like) 72 364 IPR011009 -
Arst10g00174 512 MobiDBLite consensus disorder prediction 44 66 - -
Arst10g00174 512 CDD STKc_IRAK 96 365 - -
Arst10g00174 512 Pfam Protein kinase domain 95 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00174 512 SMART serkin_6 90 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00174 512 Gene3D Transferase(Phosphotransferase) domain 1 167 383 - -
Arst10g00174 512 MobiDBLite consensus disorder prediction 449 483 - -
Arst10g00174 512 MobiDBLite consensus disorder prediction 1 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00174 Arst-Chr10 1663059 1669457 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00174 70 369 Glycoside Hydrolase AT3G07070 75.667 1.39e-169 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Arst10g00174 Pkinase 4.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00174 - - adu:107468111 986.482