Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00162 ATGTCCACCTCCTCTGGAACCTCACAGACTTACCTCAAAGGACATGAAGAACACATGAATAATTCTTCATTATCAACTCTTATTATTCTACAACGCAACACTTCATCTTCTTGTGGCACTGAGAGAAGAGGTAGAAGAAAGCAGCAATCAGCAGAACCAGGAAGATTTCTTGGTGTGAGAAGACGGCCATGGGGAAGATATGCTGCTGAGATCAGAGACCCTACAACCAAAGAGAGACACTGGCTTGGAACCTTTGACACTGCTCATGAAGCTGCTCTTGCTTATGATAGAGCTGCTCTTTCCATCAAAGGTGGCTTAGCAAGAACAAACTTCATCTACACAACCACACAAAACAACACCATCAATGGTAATAATCTTCTCAACTCTATGGATAATAATCCTCATCATCATCAACAAGTTGTTTTGCCACCTTCACAAGATTATTTCCTCAACAATACTCATCAGAATTGCATCATGTCTCACCAACTTGATGATGATATTACTTCCCTTGTCGACGATGAGAACCCTTCAAATTTGGTGATGAAGAGCGATGAGAATTTGTTCTTCTTCTCAGCCACTGATTCCACAAATTCTGGCTATCTGGAATGCATTGTTCCAGAGAATTGTTTCAGACCTATTTCTTCTAGTACTCCCACCAACAACAATACCTCAAACTCCTCCATGAGTGCTGCTTCAGCTCCTAGTGACCAAAATGTTGTTAGCAGCATTAACACAAACACCATGGAGGCATTGAAGCACGTGAGAACAATGGCACCAGATTACTATGGTGGTGAAGAACTTGATGGTCAAGGAATATTCTGGAACAATCAGGATGAGCAACAATCATCTTGGGATTGCAATAATAAGAGTAATAATTATGGTGAACTTTCAGGTATATTTGACAAACAAGAAGGTTGCATGAATGCATTGTGTCCCATCATGAATGAGACTAGTCCAAGCTATGGAGTAGTAGTGACTACTCGTGAGTCTGCTATTCCTATTCCTTCAACTACTTCTCCATCAATTCCTTCTTTGGGGGATGTCCACTTAGGAATGACCTACTCGCTCTTCTAG 1074 0.4125 MSTSSGTSQTYLKGHEEHMNNSSLSTLIILQRNTSSSCGTERRGRRKQQSAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSIKGGLARTNFIYTTTQNNTINGNNLLNSMDNNPHHHQQVVLPPSQDYFLNNTHQNCIMSHQLDDDITSLVDDENPSNLVMKSDENLFFFSATDSTNSGYLECIVPENCFRPISSSTPTNNNTSNSSMSAASAPSDQNVVSSINTNTMEALKHVRTMAPDYYGGEELDGQGIFWNNQDEQQSSWDCNNKSNNYGELSGIFDKQEGCMNALCPIMNETSPSYGVVVTTRESAIPIPSTTSPSIPSLGDVHLGMTYSLF 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00162 357 PRINTS Ethylene responsive element binding protein signature 78 94 IPR001471 GO:0003700|GO:0006355
Arst10g00162 357 PRINTS Ethylene responsive element binding protein signature 56 67 IPR001471 GO:0003700|GO:0006355
Arst10g00162 357 ProSiteProfiles AP2/ERF domain profile. 55 112 IPR001471 GO:0003700|GO:0006355
Arst10g00162 357 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 41 238 - -
Arst10g00162 357 SUPERFAMILY DNA-binding domain 56 112 IPR016177 GO:0003677
Arst10g00162 357 SMART rav1_2 55 118 IPR001471 GO:0003700|GO:0006355
Arst10g00162 357 MobiDBLite consensus disorder prediction 215 237 - -
Arst10g00162 357 MobiDBLite consensus disorder prediction 34 56 - -
Arst10g00162 357 CDD AP2 55 111 IPR001471 GO:0003700|GO:0006355
Arst10g00162 357 Pfam AP2 domain 58 104 IPR001471 GO:0003700|GO:0006355
Arst10g00162 357 FunFam Ethylene-responsive transcription factor 2 55 113 - -
Arst10g00162 357 Gene3D AP2/ERF domain 55 113 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00162 Arst-Chr10 1504527 1505614 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00162 27 226 AP2-EREBP Transcription Factor Family AT5G18560 46.250 7.69e-56 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst10g00162 AP2 1.1e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00162 - - adu:107468049 663.299