Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00136 ATGCGGAGAAATTGCAACTTGGAACTTGGGCTCTTTCCTCCCTATGATTCCGGGAGCCCAAAGCAAGAAGAAAGGCAAAGCCAGCCACGGCAGATTACAATTTTCTATGACGGAAAGATTTGTGTTTCTGATGTCACAGAGCTTCAGGCCAAATCAATCTTAATGCTTGCAAATAAAAAAGCCAATATTATTAGGACACCAACAACGGGATCATCATCATCATCGGAGCCATCTTCATCATCGTCACCGCCGCCACCACCACCGTTATTGAATAATAATAATCAACAAGTGCATAACACTATTGCTGGCACTGGACTTTCCATGAAAAGATCGCTGCAAAGGTTCCTACAGAAGAGAAAGAATCGAATCCAAGAAGCTTCCCCTTACCACCATCACTAG 399 0.4361 MRRNCNLELGLFPPYDSGSPKQEERQSQPRQITIFYDGKICVSDVTELQAKSILMLANKKANIIRTPTTGSSSSSEPSSSSSPPPPPPLLNNNNQQVHNTIAGTGLSMKRSLQRFLQKRKNRIQEASPYHHH 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00136 132 ProSiteProfiles Tify domain profile. 25 59 IPR010399 -
Arst10g00136 132 SMART tify_2 25 59 IPR010399 -
Arst10g00136 132 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 24 130 IPR040390 -
Arst10g00136 132 Pfam Jas motif 109 129 IPR018467 -
Arst10g00136 132 MobiDBLite consensus disorder prediction 1 29 - -
Arst10g00136 132 MobiDBLite consensus disorder prediction 92 108 - -
Arst10g00136 132 MobiDBLite consensus disorder prediction 60 108 - -
Arst10g00136 132 MobiDBLite consensus disorder prediction 62 78 - -
Arst10g00136 132 Pfam tify domain 27 58 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00136 Arst-Chr10 1333924 1336335 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00136 1 130 Tify Gene Family AT1G30135 40.411 7.64e-23 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Arst10g00136 tify 5.3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00136 - - gmx:100803886 129.028