Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00120 ATGGCTTTTGAGCCATTGGATTGGTATTGTCAGCCAGTTGCAAATGGAGTATGGACCACAACAGTTGACAATGCCTTCGGAGCTTACACTCCTTGCGCGGTTGATTCTTTGGTGATCTCCGTTTCTCATTTGGTGCTTCTAGGCCTGTGTGTCTACCGGATATGGTTGATTAAGAAGGATTTCAAAGCCAAAAGGTTCTGCTTACGGTCAAAACTCTATAATTATTTGCTTGGGTTGTTAGCTTTGTATTGTGTGGCCGAGCCCTTATATAGATTGATTGCTGGACTATCAATTCTAAATTTAGATGGTCAGACTCAACTTGCGCCATTTGAGATCACTTCACTGGTCATTGAAGTTCTTACTTGGGGTGCTATGCTGATTTTGATTGGCGTCGAGACTAAAGTTTACATTTACGAATTCAGATGGTTTATCCGATTTGGTTTGCTTTATTCTATTGTCGGGGATACTGTTATGCTCAACCTTATCATCTCTGTGCAGGAGTTGTATAGCAGGTCAGTGCTGTATTTGTACATAAGCGAGGTGGTCTGCCAGGCTTTGTTTGGACTACTTTTGCTTGTGTATATACCTACTTTGGATCCTTATCCGGGTTATACCCCTGTTCGGAGTGACTTGGTTGTTGATGCTGCATATGAAGAACTGCCCGGAGGAGAGCAGATATGTCCTGAAAGGCATGCAAACATATTGTCAAGAATCCTTTTTTCTTGGATGAATCCTATCATGAATCTAGGATATCAAAGACCCCTTACAGAGAAAGATATATGGAAGTTAGATACATGGGATCGGACTGAGACACTGAATGAAAAGTTCCAGAGATGTTGGGTAGAAGAATCTCGGAGGTCGAAACCTTGGCTTTTAAGAGCATTGAATGCAAGCCTTGGTGGGAGGTTTTGGTGGGGAGGATTTTGGAAGATTGGAAATGATCTCTCCCAGTTTTTGGGCCCACTAATATTGAATCAGCTGCTAGAGTCTATGCAAAATGGTGATCCAGCCTGGATTGGATACGTTTTTGCCTTCTCAATATTTGTTGGAGTGGTCTTTGGGGTGTTATGTGAAGCTCAATATTTTCAGAATGTCATGCGTGTTGGATTCCGGCTAAGATCAACACTGGTAGCTGCTGTATTTCGCAAATCATTAAGGCTTACCCATGAAGCTCGAAAGCAATTTGCATCTGGAAAAATAACCAACTTGATGACTACTGATGCCGAAGCACTTCAGCAAATATGCCAGTCACTTCATACTTTGTGGTCAGCTCCGTTCCGCATTACCATTGCCATGGTTCTTCTTTATCAACAACTAGGTGTTGCTTCCCTTTTGGGCGCTTTGATGCTAGTCCTTATGTTTCCATTACAGACATTTATCATCAGTAGAATGCAGAAGTTGTCTAAGGAAGGATTACAACGTACAGACAAGAGAATTGGCCTTATGAATGAAGTTTTGGCAGCTATGGATACTGTAAAATGTTATGCATGGGAGAGTAGTTTCCAGTCTAAAGTTCAGAATGTCCGAGATGATGAATTATCATGGTTTCGAAAAGCATCATTACTTGGAGCGTTAAATGGATTCATACTGAATAGTATTCCAGTTTTTGTAACTGTGATTTCATTTGGAATGTTCACCTTACTTGGAGGGAATTTGACACCCGCAAGAGCTTTTACATCACTTTCTCTGTTTGCTGTGCTTCGGTTTCCTCTCTTCATGCTTCCTAATATTATAACTCAGGTTATTCTCCATTGTAATTTTCTTTTGTTTTGTTGATTTACCAGCAGGATAATGACATAATGCACCCTTCAACCAAATCCACCGCTTGAGCCAGGATTACCAGCCATCTCGATCAAAAACGGAAACTTCTCCTGGGATTCCAAGGCAGAAAGGCCTACATTGGCAAACATAAACTTGGATATACCTGTTGGTAGCCTAGTTGCAGTTGTTGGAAGTACAGGAGAAGGGAAAACATCACTAGTATCTGCAATGCTTGGAGAACTCCCTGCAGTTGTAGGTTCAACTGTTGTTATGAGAGGGACAGTTGCTTACGTACCCCAAGTCTCTTGGATTTTTAATGCAACTGTGCGAGATAATGTTTTATTTGGTTCTGCCTTTGACCCAATAAGATATGAAAGGGCAATAGATGTGACTGAACTACGACATGACCTTGAGTTACTGCCTGGTGGTGATCTTACCGAAATTGGTGAAAGAGGTGTGAACATCAGTGGTGGTCAAAAGCAAAGAGTATCCATGGCTAGAGCTGTCTACTCCAAATCCGACGTGTACATTTTTGATGATCCCCTTAGTGCTCTAGATGCACATGTCGCTAAACAGGTTTTTGATAAATGCATCAAGGGAGAATTGAGAGGGAAGACCCGAGTTCTTGTTACAAATCAACTGCATTTCCTTTCACAGGTGGATAGAATCATTTTGATCCATGAAGGTACTGTGAAAGAGGAGGGAACATTTGAGGAGCTCTCTAACCAGGGGCCATTGTTCCAAAAGCTTATGGAAAATGCTGGAAAGATGGAGGAGTATGAAGAAGAAACGGTAGATACTGAAACTGCTGATCCAAAGTCCTCTTCAAAACAGGTGGCCAATGGAGAACTTAATGATACTGCAAAGAGTGGGAGTAAGGCAAAAGAAGGAAAATCTGTCCTTATTAAACAGGAAGAACGGGAAACAGGTGTTGTCAGTATGAAAGTTTTAGCAAGATACAAGACTGCATTAGGAGGTCTTTGGGTGGTTGTAATACTCTTTGGATGCTATTTCTTAACAGAAGTGTTACGAATTTCAAGTAGCACATGGTTGAGCCATTGGACTGATCAGAGTGCTTCAGTGGGCTATGATCCTGGATTTTATAATCTGATATATGCAGCTCTATCATTTGCTCAGGTTATGGTGACTTTAACAAATTCTTATTGGTTGATCATATCAAGTCTATATGCAGCCAGAAGGTTGCATGAAGCCATGCTTCACTCCATATTACAAGCTCCTATGGTTTTTTTTCATACAAATCCACTTGGAAGAGTAATCAACAGGTTTGCAAAGGATTTAGGTGACATTGATCGTAATGTTGCCCCATTTGTCAATATGTTTCTGGGTCAAGTGTCTCAGCTCCTTTCAACATTCGTCCTGATAGGGATTGTCAGCACAATGTCCTTGTGGGCGATAATGCCGTTGTTGGTACTGTTTTATGGAGCATATCTCTACTATCAGAGCACCGCCCGTGAAGTAAAGCGCTTAGATTCAATTAGTAGATCCCCTGTTTATGCACAATTTGGAGAAGCACTTAATGGTCTATCAACAATTCGCGCTTACAAGGCTTATGACCGCATGGCTGATATCAACGGAAAGTCCATGGACAACAACATACGATTCACTCTGGTGAACATGAGTGGAAATCGATGGCTTGCAATTCGATTGGAAACTCTGGGAGGTCTCATGATATGGTTTACTGCAACCTTTGCGGTAATGCAGAATGGGAGGGCCGAGACTGGTGTGCTCAGGCTTGCTAGTTTGGCTGAGAATAGTCTAAATGCCGTTGAGCGTGTTGGCACTTATATAGATTTGCCTTCAGAGGCACCATCCATCATTGAGGATAGTCGCCCCCCTCCAGGCTGGCCCTCATCTGGATCAATCAGATTTGAGGATGTTGTACTTCGATACAGGCCTGAACTTCCTCCTGTCCTTCATGGCTTGAATTTCACAATTTTTCCAAGCGATAAGGTTGGCATTGTAGGAAGGACAGGAGCTGGAAAATCTAGCATGCTTAATGCTTTATTTCGAATTGTGGAATTGGAAAGAGGAAGAATATTAATTGATGATTGTGATATTGCAAAGTTTGGGCTGGCTGATTTGCGTAAAGTTCTTGGCATTATACCACAGTCCCCTGTTTTGTTTTCAGGAACTGTAAGATTTAATCTTGACCCTTTTAATGAACACAATGATGCTGACCTCTGGGAGGCTCTGGAGAGGGCACATTTGAAGGATGTGATACGGAGGAATTCTTTGGGGCTGGATGCTGAGGTCTCTGAGGCAGGCGAGAACTTCAGTGTTGGGCAGAGGCAACTGTTGAGTCTCTCTCGGGCATTATTGCGTAGATCAAAGATATTAGTACTTGACGAAGCCACTGCAGCAGTAGATGTTAGAACAGATGCCCTCATACAGAAAACAATTCGAGAGGAATTTAAATCGTGCACCATGCTCATCATTGCTCATCGTCTTAACACCATCATAGACTGTGATAGGATTCTTTTGCTTGATGGTGGTAAGGTTCTTGAATATGATACCCCTGAAGAACTGCTATCAAATGAAGGCAGTTCGTTCTCTAAGATGGTGCAAAGTACAGGAGCCGCAAATGCCCAATATCTACGCAGCTTAGCACTCGGGAGTAAGTCAGATAGGGAAGAGAGTAAGCATAATGATGGCCAGAAAAAATGGCTTGCTTCGTCTCGCTGGGCTGCTGCAGCTCAATTTGCCCTTGCCGTCAGTCTCACCTCATCACAGAATGACCTAAAAAGATTGGAAGTGGAAGAAGAGAATAGCATACTCAAGAAAACAAGGGATGCTGTGATAACTTTGCAGGGGGTTCTGGAAAGGAAGCATGATAGAGATAGAGAAATCGAGGAATCTTTAGACCAATACCAAATATCCTCAGACAGTTGGTGGTCATCACTCTACAAGATGATTGAAGGTCTTGCAATGATGAGCAGACTGGCCAGGAGCAGGCTTCATCAATCAGACTTTGATTTTGATGATAGATCAATTAACTTTGATCAAGTTGATATGTAG 4797 0.4226 MAFEPLDWYCQPVANGVWTTTVDNAFGAYTPCAVDSLVISVSHLVLLGLCVYRIWLIKKDFKAKRFCLRSKLYNYLLGLLALYCVAEPLYRLIAGLSILNLDGQTQLAPFEITSLVIEVLTWGAMLILIGVETKVYIYEFRWFIRFGLLYSIVGDTVMLNLIISVQELYSRSVLYLYISEVVCQALFGLLLLVYIPTLDPYPGYTPVRSDLVVDAAYEELPGGEQICPERHANILSRILFSWMNPIMNLGYQRPLTEKDIWKLDTWDRTETLNEKFQRCWVEESRRSKPWLLRALNASLGGRFWWGGFWKIGNDLSQFLGPLILNQLLESMQNGDPAWIGYVFAFSIFVGVVFGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRLTHEARKQFASGKITNLMTTDAEALQQICQSLHTLWSAPFRITIAMVLLYQQLGVASLLGALMLVLMFPLQTFIISRMQKLSKEGLQRTDKRIGLMNEVLAAMDTVKCYAWESSFQSKVQNVRDDELSWFRKASLLGALNGFILNSIPVFVTVISFGMFTLLGGNLTPARAFTSLSLFAVLRFPLFMLPNIITQVILHCNFLLFCXFTSRIMTXCTLQPNPPLEPGLPAISIKNGNFSWDSKAERPTLANINLDIPVGSLVAVVGSTGEGKTSLVSAMLGELPAVVGSTVVMRGTVAYVPQVSWIFNATVRDNVLFGSAFDPIRYERAIDVTELRHDLELLPGGDLTEIGERGVNISGGQKQRVSMARAVYSKSDVYIFDDPLSALDAHVAKQVFDKCIKGELRGKTRVLVTNQLHFLSQVDRIILIHEGTVKEEGTFEELSNQGPLFQKLMENAGKMEEYEEETVDTETADPKSSSKQVANGELNDTAKSGSKAKEGKSVLIKQEERETGVVSMKVLARYKTALGGLWVVVILFGCYFLTEVLRISSSTWLSHWTDQSASVGYDPGFYNLIYAALSFAQVMVTLTNSYWLIISSLYAARRLHEAMLHSILQAPMVFFHTNPLGRVINRFAKDLGDIDRNVAPFVNMFLGQVSQLLSTFVLIGIVSTMSLWAIMPLLVLFYGAYLYYQSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDNNIRFTLVNMSGNRWLAIRLETLGGLMIWFTATFAVMQNGRAETGVLRLASLAENSLNAVERVGTYIDLPSEAPSIIEDSRPPPGWPSSGSIRFEDVVLRYRPELPPVLHGLNFTIFPSDKVGIVGRTGAGKSSMLNALFRIVELERGRILIDDCDIAKFGLADLRKVLGIIPQSPVLFSGTVRFNLDPFNEHNDADLWEALERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDGGKVLEYDTPEELLSNEGSSFSKMVQSTGAANAQYLRSLALGSKSDREESKHNDGQKKWLASSRWAAAAQFALAVSLTSSQNDLKRLEVEEENSILKKTRDAVITLQGVLERKHDRDREIEESLDQYQISSDSWWSSLYKMIEGLAMMSRLARSRLHQSDFDFDDRSINFDQVDM 1598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00120 1598 Pfam ABC transporter 634 769 IPR003439 GO:0005524
Arst10g00120 1598 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 229 1455 - -
Arst10g00120 1598 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 229 1455 - -
Arst10g00120 1598 SUPERFAMILY ABC transporter transmembrane region 289 755 IPR036640 GO:0005524|GO:0016020
Arst10g00120 1598 CDD ABC_6TM_ABCC_D1 305 582 IPR044746 GO:0140359
Arst10g00120 1598 Gene3D - 1198 1451 IPR027417 -
Arst10g00120 1598 FunFam ABC transporter C family member 2 610 856 - -
Arst10g00120 1598 FunFam ABC transporter C family member 2 881 1196 - -
Arst10g00120 1598 MobiDBLite consensus disorder prediction 845 878 - -
Arst10g00120 1598 Gene3D - 610 866 IPR027417 -
Arst10g00120 1598 ProSitePatterns ABC transporters family signature. 742 756 IPR017871 GO:0005524|GO:0016887
Arst10g00120 1598 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 918 1170 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g00120 1598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1206 1441 IPR027417 -
Arst10g00120 1598 SUPERFAMILY ABC transporter transmembrane region 914 1195 IPR036640 GO:0005524|GO:0016020
Arst10g00120 1598 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 618 840 IPR003439 GO:0005524
Arst10g00120 1598 Gene3D ABC transporter type 1, transmembrane domain 880 1196 IPR036640 GO:0005524|GO:0016020
Arst10g00120 1598 Gene3D ABC transporter type 1, transmembrane domain 277 584 IPR036640 GO:0005524|GO:0016020
Arst10g00120 1598 CDD ABCC_MRP_domain1 616 817 - -
Arst10g00120 1598 ProSitePatterns ABC transporters family signature. 1352 1366 IPR017871 GO:0005524|GO:0016887
Arst10g00120 1598 Pfam ABC transporter transmembrane region 918 1159 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g00120 1598 Pfam ABC transporter transmembrane region 307 571 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g00120 1598 CDD ABCC_MRP_domain2 1213 1433 - -
Arst10g00120 1598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 612 839 IPR027417 -
Arst10g00120 1598 MobiDBLite consensus disorder prediction 858 875 - -
Arst10g00120 1598 Pfam ABC transporter 1232 1380 IPR003439 GO:0005524
Arst10g00120 1598 FunFam ABC transporter C family member 2 279 587 - -
Arst10g00120 1598 FunFam Multidrug resistance-associated protein member 4 1199 1451 - -
Arst10g00120 1598 SMART AAA_5 1241 1434 IPR003593 GO:0016887
Arst10g00120 1598 SMART AAA_5 643 817 IPR003593 GO:0016887
Arst10g00120 1598 CDD ABC_6TM_ABCC_D2 917 1190 IPR044726 GO:0140359
Arst10g00120 1598 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1215 1449 IPR003439 GO:0005524
Arst10g00120 1598 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 304 583 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00120 Arst-Chr10 1234216 1247866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00120 603 832 Calmodulin-binding Proteins AT2G36910 27.016 1.31e-22 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00120 - - gmx:100801762 2687.91