Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst10g00120 | ATGGCTTTTGAGCCATTGGATTGGTATTGTCAGCCAGTTGCAAATGGAGTATGGACCACAACAGTTGACAATGCCTTCGGAGCTTACACTCCTTGCGCGGTTGATTCTTTGGTGATCTCCGTTTCTCATTTGGTGCTTCTAGGCCTGTGTGTCTACCGGATATGGTTGATTAAGAAGGATTTCAAAGCCAAAAGGTTCTGCTTACGGTCAAAACTCTATAATTATTTGCTTGGGTTGTTAGCTTTGTATTGTGTGGCCGAGCCCTTATATAGATTGATTGCTGGACTATCAATTCTAAATTTAGATGGTCAGACTCAACTTGCGCCATTTGAGATCACTTCACTGGTCATTGAAGTTCTTACTTGGGGTGCTATGCTGATTTTGATTGGCGTCGAGACTAAAGTTTACATTTACGAATTCAGATGGTTTATCCGATTTGGTTTGCTTTATTCTATTGTCGGGGATACTGTTATGCTCAACCTTATCATCTCTGTGCAGGAGTTGTATAGCAGGTCAGTGCTGTATTTGTACATAAGCGAGGTGGTCTGCCAGGCTTTGTTTGGACTACTTTTGCTTGTGTATATACCTACTTTGGATCCTTATCCGGGTTATACCCCTGTTCGGAGTGACTTGGTTGTTGATGCTGCATATGAAGAACTGCCCGGAGGAGAGCAGATATGTCCTGAAAGGCATGCAAACATATTGTCAAGAATCCTTTTTTCTTGGATGAATCCTATCATGAATCTAGGATATCAAAGACCCCTTACAGAGAAAGATATATGGAAGTTAGATACATGGGATCGGACTGAGACACTGAATGAAAAGTTCCAGAGATGTTGGGTAGAAGAATCTCGGAGGTCGAAACCTTGGCTTTTAAGAGCATTGAATGCAAGCCTTGGTGGGAGGTTTTGGTGGGGAGGATTTTGGAAGATTGGAAATGATCTCTCCCAGTTTTTGGGCCCACTAATATTGAATCAGCTGCTAGAGTCTATGCAAAATGGTGATCCAGCCTGGATTGGATACGTTTTTGCCTTCTCAATATTTGTTGGAGTGGTCTTTGGGGTGTTATGTGAAGCTCAATATTTTCAGAATGTCATGCGTGTTGGATTCCGGCTAAGATCAACACTGGTAGCTGCTGTATTTCGCAAATCATTAAGGCTTACCCATGAAGCTCGAAAGCAATTTGCATCTGGAAAAATAACCAACTTGATGACTACTGATGCCGAAGCACTTCAGCAAATATGCCAGTCACTTCATACTTTGTGGTCAGCTCCGTTCCGCATTACCATTGCCATGGTTCTTCTTTATCAACAACTAGGTGTTGCTTCCCTTTTGGGCGCTTTGATGCTAGTCCTTATGTTTCCATTACAGACATTTATCATCAGTAGAATGCAGAAGTTGTCTAAGGAAGGATTACAACGTACAGACAAGAGAATTGGCCTTATGAATGAAGTTTTGGCAGCTATGGATACTGTAAAATGTTATGCATGGGAGAGTAGTTTCCAGTCTAAAGTTCAGAATGTCCGAGATGATGAATTATCATGGTTTCGAAAAGCATCATTACTTGGAGCGTTAAATGGATTCATACTGAATAGTATTCCAGTTTTTGTAACTGTGATTTCATTTGGAATGTTCACCTTACTTGGAGGGAATTTGACACCCGCAAGAGCTTTTACATCACTTTCTCTGTTTGCTGTGCTTCGGTTTCCTCTCTTCATGCTTCCTAATATTATAACTCAGGTTATTCTCCATTGTAATTTTCTTTTGTTTTGTTGATTTACCAGCAGGATAATGACATAATGCACCCTTCAACCAAATCCACCGCTTGAGCCAGGATTACCAGCCATCTCGATCAAAAACGGAAACTTCTCCTGGGATTCCAAGGCAGAAAGGCCTACATTGGCAAACATAAACTTGGATATACCTGTTGGTAGCCTAGTTGCAGTTGTTGGAAGTACAGGAGAAGGGAAAACATCACTAGTATCTGCAATGCTTGGAGAACTCCCTGCAGTTGTAGGTTCAACTGTTGTTATGAGAGGGACAGTTGCTTACGTACCCCAAGTCTCTTGGATTTTTAATGCAACTGTGCGAGATAATGTTTTATTTGGTTCTGCCTTTGACCCAATAAGATATGAAAGGGCAATAGATGTGACTGAACTACGACATGACCTTGAGTTACTGCCTGGTGGTGATCTTACCGAAATTGGTGAAAGAGGTGTGAACATCAGTGGTGGTCAAAAGCAAAGAGTATCCATGGCTAGAGCTGTCTACTCCAAATCCGACGTGTACATTTTTGATGATCCCCTTAGTGCTCTAGATGCACATGTCGCTAAACAGGTTTTTGATAAATGCATCAAGGGAGAATTGAGAGGGAAGACCCGAGTTCTTGTTACAAATCAACTGCATTTCCTTTCACAGGTGGATAGAATCATTTTGATCCATGAAGGTACTGTGAAAGAGGAGGGAACATTTGAGGAGCTCTCTAACCAGGGGCCATTGTTCCAAAAGCTTATGGAAAATGCTGGAAAGATGGAGGAGTATGAAGAAGAAACGGTAGATACTGAAACTGCTGATCCAAAGTCCTCTTCAAAACAGGTGGCCAATGGAGAACTTAATGATACTGCAAAGAGTGGGAGTAAGGCAAAAGAAGGAAAATCTGTCCTTATTAAACAGGAAGAACGGGAAACAGGTGTTGTCAGTATGAAAGTTTTAGCAAGATACAAGACTGCATTAGGAGGTCTTTGGGTGGTTGTAATACTCTTTGGATGCTATTTCTTAACAGAAGTGTTACGAATTTCAAGTAGCACATGGTTGAGCCATTGGACTGATCAGAGTGCTTCAGTGGGCTATGATCCTGGATTTTATAATCTGATATATGCAGCTCTATCATTTGCTCAGGTTATGGTGACTTTAACAAATTCTTATTGGTTGATCATATCAAGTCTATATGCAGCCAGAAGGTTGCATGAAGCCATGCTTCACTCCATATTACAAGCTCCTATGGTTTTTTTTCATACAAATCCACTTGGAAGAGTAATCAACAGGTTTGCAAAGGATTTAGGTGACATTGATCGTAATGTTGCCCCATTTGTCAATATGTTTCTGGGTCAAGTGTCTCAGCTCCTTTCAACATTCGTCCTGATAGGGATTGTCAGCACAATGTCCTTGTGGGCGATAATGCCGTTGTTGGTACTGTTTTATGGAGCATATCTCTACTATCAGAGCACCGCCCGTGAAGTAAAGCGCTTAGATTCAATTAGTAGATCCCCTGTTTATGCACAATTTGGAGAAGCACTTAATGGTCTATCAACAATTCGCGCTTACAAGGCTTATGACCGCATGGCTGATATCAACGGAAAGTCCATGGACAACAACATACGATTCACTCTGGTGAACATGAGTGGAAATCGATGGCTTGCAATTCGATTGGAAACTCTGGGAGGTCTCATGATATGGTTTACTGCAACCTTTGCGGTAATGCAGAATGGGAGGGCCGAGACTGGTGTGCTCAGGCTTGCTAGTTTGGCTGAGAATAGTCTAAATGCCGTTGAGCGTGTTGGCACTTATATAGATTTGCCTTCAGAGGCACCATCCATCATTGAGGATAGTCGCCCCCCTCCAGGCTGGCCCTCATCTGGATCAATCAGATTTGAGGATGTTGTACTTCGATACAGGCCTGAACTTCCTCCTGTCCTTCATGGCTTGAATTTCACAATTTTTCCAAGCGATAAGGTTGGCATTGTAGGAAGGACAGGAGCTGGAAAATCTAGCATGCTTAATGCTTTATTTCGAATTGTGGAATTGGAAAGAGGAAGAATATTAATTGATGATTGTGATATTGCAAAGTTTGGGCTGGCTGATTTGCGTAAAGTTCTTGGCATTATACCACAGTCCCCTGTTTTGTTTTCAGGAACTGTAAGATTTAATCTTGACCCTTTTAATGAACACAATGATGCTGACCTCTGGGAGGCTCTGGAGAGGGCACATTTGAAGGATGTGATACGGAGGAATTCTTTGGGGCTGGATGCTGAGGTCTCTGAGGCAGGCGAGAACTTCAGTGTTGGGCAGAGGCAACTGTTGAGTCTCTCTCGGGCATTATTGCGTAGATCAAAGATATTAGTACTTGACGAAGCCACTGCAGCAGTAGATGTTAGAACAGATGCCCTCATACAGAAAACAATTCGAGAGGAATTTAAATCGTGCACCATGCTCATCATTGCTCATCGTCTTAACACCATCATAGACTGTGATAGGATTCTTTTGCTTGATGGTGGTAAGGTTCTTGAATATGATACCCCTGAAGAACTGCTATCAAATGAAGGCAGTTCGTTCTCTAAGATGGTGCAAAGTACAGGAGCCGCAAATGCCCAATATCTACGCAGCTTAGCACTCGGGAGTAAGTCAGATAGGGAAGAGAGTAAGCATAATGATGGCCAGAAAAAATGGCTTGCTTCGTCTCGCTGGGCTGCTGCAGCTCAATTTGCCCTTGCCGTCAGTCTCACCTCATCACAGAATGACCTAAAAAGATTGGAAGTGGAAGAAGAGAATAGCATACTCAAGAAAACAAGGGATGCTGTGATAACTTTGCAGGGGGTTCTGGAAAGGAAGCATGATAGAGATAGAGAAATCGAGGAATCTTTAGACCAATACCAAATATCCTCAGACAGTTGGTGGTCATCACTCTACAAGATGATTGAAGGTCTTGCAATGATGAGCAGACTGGCCAGGAGCAGGCTTCATCAATCAGACTTTGATTTTGATGATAGATCAATTAACTTTGATCAAGTTGATATGTAG | 4797 | 0.4226 | MAFEPLDWYCQPVANGVWTTTVDNAFGAYTPCAVDSLVISVSHLVLLGLCVYRIWLIKKDFKAKRFCLRSKLYNYLLGLLALYCVAEPLYRLIAGLSILNLDGQTQLAPFEITSLVIEVLTWGAMLILIGVETKVYIYEFRWFIRFGLLYSIVGDTVMLNLIISVQELYSRSVLYLYISEVVCQALFGLLLLVYIPTLDPYPGYTPVRSDLVVDAAYEELPGGEQICPERHANILSRILFSWMNPIMNLGYQRPLTEKDIWKLDTWDRTETLNEKFQRCWVEESRRSKPWLLRALNASLGGRFWWGGFWKIGNDLSQFLGPLILNQLLESMQNGDPAWIGYVFAFSIFVGVVFGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRLTHEARKQFASGKITNLMTTDAEALQQICQSLHTLWSAPFRITIAMVLLYQQLGVASLLGALMLVLMFPLQTFIISRMQKLSKEGLQRTDKRIGLMNEVLAAMDTVKCYAWESSFQSKVQNVRDDELSWFRKASLLGALNGFILNSIPVFVTVISFGMFTLLGGNLTPARAFTSLSLFAVLRFPLFMLPNIITQVILHCNFLLFCXFTSRIMTXCTLQPNPPLEPGLPAISIKNGNFSWDSKAERPTLANINLDIPVGSLVAVVGSTGEGKTSLVSAMLGELPAVVGSTVVMRGTVAYVPQVSWIFNATVRDNVLFGSAFDPIRYERAIDVTELRHDLELLPGGDLTEIGERGVNISGGQKQRVSMARAVYSKSDVYIFDDPLSALDAHVAKQVFDKCIKGELRGKTRVLVTNQLHFLSQVDRIILIHEGTVKEEGTFEELSNQGPLFQKLMENAGKMEEYEEETVDTETADPKSSSKQVANGELNDTAKSGSKAKEGKSVLIKQEERETGVVSMKVLARYKTALGGLWVVVILFGCYFLTEVLRISSSTWLSHWTDQSASVGYDPGFYNLIYAALSFAQVMVTLTNSYWLIISSLYAARRLHEAMLHSILQAPMVFFHTNPLGRVINRFAKDLGDIDRNVAPFVNMFLGQVSQLLSTFVLIGIVSTMSLWAIMPLLVLFYGAYLYYQSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDNNIRFTLVNMSGNRWLAIRLETLGGLMIWFTATFAVMQNGRAETGVLRLASLAENSLNAVERVGTYIDLPSEAPSIIEDSRPPPGWPSSGSIRFEDVVLRYRPELPPVLHGLNFTIFPSDKVGIVGRTGAGKSSMLNALFRIVELERGRILIDDCDIAKFGLADLRKVLGIIPQSPVLFSGTVRFNLDPFNEHNDADLWEALERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDGGKVLEYDTPEELLSNEGSSFSKMVQSTGAANAQYLRSLALGSKSDREESKHNDGQKKWLASSRWAAAAQFALAVSLTSSQNDLKRLEVEEENSILKKTRDAVITLQGVLERKHDRDREIEESLDQYQISSDSWWSSLYKMIEGLAMMSRLARSRLHQSDFDFDDRSINFDQVDM | 1598 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst10g00120 | 1598 | Pfam | ABC transporter | 634 | 769 | IPR003439 | GO:0005524 | |
Arst10g00120 | 1598 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 229 | 1455 | - | - | |
Arst10g00120 | 1598 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 229 | 1455 | - | - | |
Arst10g00120 | 1598 | SUPERFAMILY | ABC transporter transmembrane region | 289 | 755 | IPR036640 | GO:0005524|GO:0016020 | |
Arst10g00120 | 1598 | CDD | ABC_6TM_ABCC_D1 | 305 | 582 | IPR044746 | GO:0140359 | |
Arst10g00120 | 1598 | Gene3D | - | 1198 | 1451 | IPR027417 | - | |
Arst10g00120 | 1598 | FunFam | ABC transporter C family member 2 | 610 | 856 | - | - | |
Arst10g00120 | 1598 | FunFam | ABC transporter C family member 2 | 881 | 1196 | - | - | |
Arst10g00120 | 1598 | MobiDBLite | consensus disorder prediction | 845 | 878 | - | - | |
Arst10g00120 | 1598 | Gene3D | - | 610 | 866 | IPR027417 | - | |
Arst10g00120 | 1598 | ProSitePatterns | ABC transporters family signature. | 742 | 756 | IPR017871 | GO:0005524|GO:0016887 | |
Arst10g00120 | 1598 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 918 | 1170 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Arst10g00120 | 1598 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1206 | 1441 | IPR027417 | - | |
Arst10g00120 | 1598 | SUPERFAMILY | ABC transporter transmembrane region | 914 | 1195 | IPR036640 | GO:0005524|GO:0016020 | |
Arst10g00120 | 1598 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 618 | 840 | IPR003439 | GO:0005524 | |
Arst10g00120 | 1598 | Gene3D | ABC transporter type 1, transmembrane domain | 880 | 1196 | IPR036640 | GO:0005524|GO:0016020 | |
Arst10g00120 | 1598 | Gene3D | ABC transporter type 1, transmembrane domain | 277 | 584 | IPR036640 | GO:0005524|GO:0016020 | |
Arst10g00120 | 1598 | CDD | ABCC_MRP_domain1 | 616 | 817 | - | - | |
Arst10g00120 | 1598 | ProSitePatterns | ABC transporters family signature. | 1352 | 1366 | IPR017871 | GO:0005524|GO:0016887 | |
Arst10g00120 | 1598 | Pfam | ABC transporter transmembrane region | 918 | 1159 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Arst10g00120 | 1598 | Pfam | ABC transporter transmembrane region | 307 | 571 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Arst10g00120 | 1598 | CDD | ABCC_MRP_domain2 | 1213 | 1433 | - | - | |
Arst10g00120 | 1598 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 612 | 839 | IPR027417 | - | |
Arst10g00120 | 1598 | MobiDBLite | consensus disorder prediction | 858 | 875 | - | - | |
Arst10g00120 | 1598 | Pfam | ABC transporter | 1232 | 1380 | IPR003439 | GO:0005524 | |
Arst10g00120 | 1598 | FunFam | ABC transporter C family member 2 | 279 | 587 | - | - | |
Arst10g00120 | 1598 | FunFam | Multidrug resistance-associated protein member 4 | 1199 | 1451 | - | - | |
Arst10g00120 | 1598 | SMART | AAA_5 | 1241 | 1434 | IPR003593 | GO:0016887 | |
Arst10g00120 | 1598 | SMART | AAA_5 | 643 | 817 | IPR003593 | GO:0016887 | |
Arst10g00120 | 1598 | CDD | ABC_6TM_ABCC_D2 | 917 | 1190 | IPR044726 | GO:0140359 | |
Arst10g00120 | 1598 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1215 | 1449 | IPR003439 | GO:0005524 | |
Arst10g00120 | 1598 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 304 | 583 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst10g00120 | Arst-Chr10 | 1234216 | 1247866 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst10g00120 | 603 | 832 | Calmodulin-binding Proteins | AT2G36910 | 27.016 | 1.31e-22 | 103 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst10g00120 | - | - | gmx:100801762 | 2687.91 |