Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00116 ATGGTAGATAGTGGTTTTGGTGGTGGTCGTGATTCTGGGATGAGCTTGGAGACTGTGAATTCTGCACAGAGAACGTCCATGAGCAGTGACAGCATCTGTAGCACCAGCTTCAGCCGTCTCTCCTTCGACCTCCTACCTACCTCGCCGGAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCCTCTGACTTTGCATACTCCGCCATCCGCTCCGCCACTTTCCGCCGCAAGTCCGGTCTCACCTTCCGCGACTTTCACCTCCTCCGCCGTATAGGCGCCGGTGACATCGGCACCGTCTACCTCTGCCGCCTCCGTGACTCAGCCGCCGCCTCCGATGAGTTCCCCTCCGGTGAGTACGACAACTCCAACAGCAACGGTGACGATGAACCCGCCGGGTGCTTCTACGCGATGAAGGTGGTGGACAAAGAGGCGGTGGCGATGAAGAACAAGTCGCAGAGGGCCGAAATGGAGAGGAAGATCCTAAAGATGTTGGACCATCCGTTCCTTCCTACCCTATATGCGGAGTTTGAAGCGTCTCATTTTTCTTGCATTGTGATGGAGTTTTGTCCCGGCGGCGACCTCCACTCCCTCCGCTACAAGCAACCACAAAAACGGTTCCCTCTCTCCTCCGCAAGGTTTTACGCTGCGGAGGTACTGGTTGCTTTGGAATACCTGCACATGCTTGGAATCATCTACAGGGATCTAAAGCCCGAAAACGTGTTGGTCAGATCAGACGGTCACATCATGCTCTCCGATTTCGATCTCTCCCTTTGTTCCGATGCAATCCCAGCTGTTGAATCCTCTGACTATTCCCCTGACTCAGAAAATACATTCCCTCTACCATACACAAACACACGCACTTACTCAGCAACGCCACTATTCTCCTGTCTCTCTAGGAAAGTTCAGACGCTCAACCCAAAGCGCCTCTTCGTGGCGGAGCCCGTCGGAGCACGCTCCTGCTCCTTCGTCGGAACTCACGAGTACGTGTCGCCAGAGGTTGCCTCCGGAAACTCCCACGGAAATGCCGTTGACTGGTGGTCTTTCGGGATATTCGTATACGAGCTCGTGTATGGTCGTACGCCGTTTGCTGGTCCATCCAACGATGTGACACTGCACAACATCATAAAGAAGCCGTTGGCGTTTCCCACAGCCACGCCCTGTAGCACGCTTGAGCACCACGCCCGGGACCTCATAAGTGGCTTGCTCCACAAGGACCCCACTCGAAGACTCGGGTCCAGGCGGGGCGCTGCTGACGTCAAAAAACACCCCTTCTTCGGCGGGATCAACCTGGCGCTCATCAGGATGCTCACTCCGCCGGAGATTCCCTATCTCAGGAGGCAAAAAACGATGCCTTCTTCGTTGTTCTCTACTACTACTAAAGGTCACAACACCATAATGAGTAATAAGCAGTTGCAAACAACGGCGTCGTTTGATTGCTTTTGA 1452 0.5317 MVDSGFGGGRDSGMSLETVNSAQRTSMSSDSICSTSFSRLSFDLLPTSPEXXXXXXXXXXXXXSSDFAYSAIRSATFRRKSGLTFRDFHLLRRIGAGDIGTVYLCRLRDSAAASDEFPSGEYDNSNSNGDDEPAGCFYAMKVVDKEAVAMKNKSQRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCPGGDLHSLRYKQPQKRFPLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVESSDYSPDSENTFPLPYTNTRTYSATPLFSCLSRKVQTLNPKRLFVAEPVGARSCSFVGTHEYVSPEVASGNSHGNAVDWWSFGIFVYELVYGRTPFAGPSNDVTLHNIIKKPLAFPTATPCSTLEHHARDLISGLLHKDPTRRLGSRRGAADVKKHPFFGGINLALIRMLTPPEIPYLRRQKTMPSSLFSTTTKGHNTIMSNKQLQTTASFDCF 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00116 483 Pfam Protein kinase domain 322 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00116 483 Pfam Protein kinase domain 133 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00116 483 Gene3D Phosphorylase Kinase; domain 1 86 191 - -
Arst10g00116 483 MobiDBLite consensus disorder prediction 1 21 - -
Arst10g00116 483 Gene3D Transferase(Phosphotransferase) domain 1 192 259 - -
Arst10g00116 483 ProSiteProfiles Protein kinase domain profile. 88 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00116 483 FunFam protein kinase PINOID 192 260 - -
Arst10g00116 483 Gene3D Transferase(Phosphotransferase) domain 1 321 446 - -
Arst10g00116 483 SUPERFAMILY Protein kinase-like (PK-like) 71 462 IPR011009 -
Arst10g00116 483 SMART serkin_6 88 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00116 483 FunFam protein kinase PINOID 2 86 191 - -
Arst10g00116 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Arst10g00116 483 PANTHER FLIPPASE KINASE 1-RELATED 36 448 - -
Arst10g00116 483 CDD STKc_phototropin_like 86 445 - -
Arst10g00116 483 FunFam serine/threonine-protein kinase D6PK-like 320 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00116 Arst-Chr10 1189740 1191746 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00116 11 483 AGC Kinase Gene Family AT2G34650 63.235 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Arst10g00116 Pkinase 2e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00116 - - gmx:100815648 640.188