Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00092 ATGTCAATATTTTCCTCAACGTGTTTAACTGATCCACGTTTCATTTGCCATGGATTCCTACTTCCCATTCTTCTATTGCTACTGCAGATTTCATCTCAACTTGGAGACTGTGGTACCATTGTTAAGTACCTTCCAGGATTCCAGGGACCACTTCCTTTTCTGCTTGAAACTGGGTATATAGGAGTAGGAGAAAATGATGATGTTCAGAGTTTCTACTATTTCATTGAGTCAGAGAACAATCCAAGAGAGGATCCTCTCATGCTCTGGCTCACTGGTGGTCCTGGCTGCTCTGCTTTTTCTGGCCTTGTCTATGAAATAGGACCACTTGCATTTCAAGTTGATGAATATGATGGCGGCCTCCCTAGTTTGGTGTATAAGCCAAACTCATGGACTAAGGTAAGTAGCATTGTATTTGTAGATTTGCCTGTCAATACTGGCTTTTCATATGCTAGAACGGAATTCGCTTCACAACGGAGCGATTCCTTGTCAGTCAATCAAGCCTATCAATTTTTGAGGAAGTGGATAATGGATCATCCAGAATTTCTCAACAACAAAGTTTACATTGCTGGTGATTCATATTCTGGTATGCATGTTCCTATAATTGCTGACGAAATTTCAAAAGCAAATGAACGAGGCCTCCAACCATGGATAAATCTGCAGGGATACCTGATGGGGAATCCTATAATAGATCGAAATCAAAAAAATTATGTAATCTCATTTGCTCATGGGATGGGACTCATTTCTGATGAACTATACAAGTCACTGCAAAAACATTGTAAAGGAGAATATGTAAATGTAGACATGAGAAATGTTTTGTGTTCAAGAGATCTCAACTCCTTTGATGAGATCACATCAGGTATTGCAACAGCCAACATTTTGGAGCCCAAGTGTGAGTTCGCCACACAGAAGCCATTGGAATCTTCTTGGAGGAGATCACTAACAGATAACTATCACGGGAAGTTCAAAGATACTCATCTCAGATTACCATCCAGGAATTGCCGGAGTTATGGATATCTCCTTAGTGCCTATTGGGCCAATGATGACAAAGTCCGCAATGCCCTTAACGTGCGGAAGGGAACTAAAAAGAAATGGAAACGCTGCACCAGAAATATGCCTTACAAGTATGATATCTCTAGCAACTTTCCATATCAAGTAAATCTCAGCAGAAAAGGCTATCGTTCCTTGATTTACAGTGGGGATCATGACATGGTTGTTCCTTTCTTGGCAACTCAAGCATGGATAAGATCGTTAAACTACTCCATTGTCGACGATTGGAGGCCATGGTATACTAATGGACAAGTTGCAGGATACACAAGGACTTACTCCAATGCAATGACATTTGCAACTGTCAAGGGTGGTGGCCACACAGCTCCAGAGTATAAGCCTGAAGAATGCTTGAACATGTACAGTAGATGGATGTCTAGGATGGCTTTGTAG 1437 0.412 MSIFSSTCLTDPRFICHGFLLPILLLLLQISSQLGDCGTIVKYLPGFQGPLPFLLETGYIGVGENDDVQSFYYFIESENNPREDPLMLWLTGGPGCSAFSGLVYEIGPLAFQVDEYDGGLPSLVYKPNSWTKVSSIVFVDLPVNTGFSYARTEFASQRSDSLSVNQAYQFLRKWIMDHPEFLNNKVYIAGDSYSGMHVPIIADEISKANERGLQPWINLQGYLMGNPIIDRNQKNYVISFAHGMGLISDELYKSLQKHCKGEYVNVDMRNVLCSRDLNSFDEITSGIATANILEPKCEFATQKPLESSWRRSLTDNYHGKFKDTHLRLPSRNCRSYGYLLSAYWANDDKVRNALNVRKGTKKKWKRCTRNMPYKYDISSNFPYQVNLSRKGYRSLIYSGDHDMVVPFLATQAWIRSLNYSIVDDWRPWYTNGQVAGYTRTYSNAMTFATVKGGGHTAPEYKPEECLNMYSRWMSRMAL 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00092 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 138 IPR001563 GO:0004185|GO:0006508
Arst10g00092 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 199 IPR001563 GO:0004185|GO:0006508
Arst10g00092 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 445 458 IPR001563 GO:0004185|GO:0006508
Arst10g00092 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 149 IPR001563 GO:0004185|GO:0006508
Arst10g00092 478 FunFam Carboxypeptidase 381 475 - -
Arst10g00092 478 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 462 IPR001563 GO:0004185|GO:0006508
Arst10g00092 478 Gene3D alpha/beta hydrolase 38 306 IPR029058 -
Arst10g00092 478 FunFam Carboxypeptidase 332 477 - -
Arst10g00092 478 FunFam Serine carboxypeptidase-like 11 35 478 - -
Arst10g00092 478 SUPERFAMILY alpha/beta-Hydrolases 41 476 IPR029058 -
Arst10g00092 478 Gene3D - 333 476 - -
Arst10g00092 478 Pfam Serine carboxypeptidase 45 474 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00092 Arst-Chr10 1030613 1054191 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00092 35 64 Calmodulin-binding Proteins AT2G22960 66.667 5.97e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00092 K16296 - gmx:100794342 684.871