Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00090 ATGTCAATATTTTCCTCAACGTGTTTAACTGATCCACGTTTCATTTGCCATGGATTCCTACTTCCCATTCTTCTATTGCTACTGCAGATTTCATCTCAACTTGGAGACTGTGGTACCATTGTTAAGTACCTTCCAGGATTCCAGGGACCACTTCCTTTTCTGCTTGAAACTGGGTATATAGGAGTAGGAGAAAATGATGATGTTCAGAGTTTCTACTATTTCATTGAGTCAGAGAACAATCCAAGAGAGGATCCTCTCATGCTCTGGCTCACTGGTGGTCCTGGCTGCTCTGCTTTTTCTGGCCTTGTCTATGAAATAGGACCACTTGCATTTCAAGTTGATGAATATGATGGCGGCCTCCCTAGTTTGGTGTATAAGCCAAACTCATGGACTAAGGTAAGTAGCATTGTATTTGTAGATTTGCCTGTCAATACTGGCTTTTCATATGCTAGAACGGAATTCGCTTCACAACGGAGCGATTCCTTGTCAGTCAATCAAGCCTATCAATTTTTGAGGAAGTGGATAATGGATCATCCAGAATTTCTCAACAACAAAGTTTACATTGCTGGTGATTCATATTCTGGTATGCATGTTCCTATAATTGCTGACGAAATTTCAAAAGCAAATGAACGAGGCCTCCAACCATGGATAAATCTGCAGGGATACCTGATGGGGAATCCTATAATAGATCGAAATCAAAAAAATTATGTAATCTCATTTGCTCATGGGATGGGACTCATTTCTGATGAACTATACAAGTCACTGCAAAAACATTGTAAAGGAGAATATGTAAATGTAGACATGAGAAATGTTTTGTGTTCAAGAGATCTCAACTCCTTTGATGAGATCACATCAGGTATTGCAACAGCCAACATTTTGGAGCCCAAGTGTGAGTTCGCCACACAGAAGCCATTGGAATCTTCTTGGAGGAGATCACTAACAGATAACTATCACGGGAAGTTCAAAGATACTCATCTCAGATTACCATCCAGGAATTGCCGGAGTTATGGATATCTCCTTAGTGCCTATTGGGCCAATGATGACAAAGTCCGCAATGCCCTTAACGTGCGGAAGGGAACTAAAAAGAAATGGAAACGCTGCACCAGAAATATGCCTTACAAGTATGATATCTCTAGCAACTTTCCATATCAAGTAAATCTCAGCAGAAAAGGCTATCGTTCCTTGATTTACAGATACACAAGGACTTACTCCAATGCAATGACATTTGCAACTGTCAAGGGTGGAGGGCACACAGCACCAGAGTACAAGCCTCAAGAATGCTTTCACATGTATAGTAGATGGATATCTGAGAGACCTTTCTAG 1323 0.4082 MSIFSSTCLTDPRFICHGFLLPILLLLLQISSQLGDCGTIVKYLPGFQGPLPFLLETGYIGVGENDDVQSFYYFIESENNPREDPLMLWLTGGPGCSAFSGLVYEIGPLAFQVDEYDGGLPSLVYKPNSWTKVSSIVFVDLPVNTGFSYARTEFASQRSDSLSVNQAYQFLRKWIMDHPEFLNNKVYIAGDSYSGMHVPIIADEISKANERGLQPWINLQGYLMGNPIIDRNQKNYVISFAHGMGLISDELYKSLQKHCKGEYVNVDMRNVLCSRDLNSFDEITSGIATANILEPKCEFATQKPLESSWRRSLTDNYHGKFKDTHLRLPSRNCRSYGYLLSAYWANDDKVRNALNVRKGTKKKWKRCTRNMPYKYDISSNFPYQVNLSRKGYRSLIYRYTRTYSNAMTFATVKGGGHTAPEYKPQECFHMYSRWISERPF 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00090 440 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 424 IPR001563 GO:0004185|GO:0006508
Arst10g00090 440 Pfam Serine carboxypeptidase 398 436 IPR001563 GO:0004185|GO:0006508
Arst10g00090 440 Pfam Serine carboxypeptidase 45 397 IPR001563 GO:0004185|GO:0006508
Arst10g00090 440 Gene3D alpha/beta hydrolase 38 306 IPR029058 -
Arst10g00090 440 FunFam Serine carboxypeptidase-like 19 35 303 - -
Arst10g00090 440 SUPERFAMILY alpha/beta-Hydrolases 41 439 IPR029058 -
Arst10g00090 440 Gene3D - 398 440 - -
Arst10g00090 440 Gene3D - 333 397 - -
Arst10g00090 440 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 138 IPR001563 GO:0004185|GO:0006508
Arst10g00090 440 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 149 IPR001563 GO:0004185|GO:0006508
Arst10g00090 440 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 199 IPR001563 GO:0004185|GO:0006508
Arst10g00090 440 PRINTS Carboxypeptidase C serine protease (S10) family signature 407 420 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00090 Arst-Chr10 1030612 1034166 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00090 35 64 Calmodulin-binding Proteins AT2G22960 66.667 5.88e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00090 K16296 - gmx:100794342 591.267