Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00088 ATGTCAATATTTTCCTCAACGTGTTTAACTGATCCACGTTTCATTTGCCATGGATTCCTACTTCCCATTCTTCTATTGCTACTGCAGATTTCATCTCAACTTGGAGACTGTGGTACCATTGTTAAGTACCTTCCAGGATTCCAGGGACCACTTCCTTTTCTGCTTGAAACTGGGTATATAGGAGTAGGAGAAAATGATGATGTTCAGAGTTTCTACTATTTCATTGAGTCAGAGAACAATCCAAGAGAGGATCCTCTCATGCTCTGGCTCACTGGTGGTCCTGGCTGCTCTGCTTTTTCTGGCCTTGTCTATGAAATAGGACCACTTGCATTTCAAGTTGATGAATATGATGGCGGCCTCCCTAGTTTGGTGTATAAGCCAAACTCATGGACTAAGGTAAGTAGCATTGTATTTGTAGATTTGCCTGTCAATACTGGCTTTTCATATGCTAGAACGGAATTCGCTTCACAACGGAGCGATTCCTTGTCAGTCAATCAAGCCTATCAATTTTTGAGGAAGTGGATAATGGATCATCCAGAATTTCTCAACAACAAAGTTTACATTGCTGGTGATTCATATTCTGGTATGCATGTTCCTATAATTGCTGACGAAATTTCAAAAGCAAATGAACGAGGCCTCCAACCATGGATAAATCTGCAGGGATACCTGATGGGGAATCCTAAAATAGATGAAAAAGAAAAAAACTATCGAATCCCATTTGCTCATGGGATGGGACTCATTTCTGATGAACTGCACCAGTCACTGCAGAAACATTGTAAAGGAGAATATGTAAATGTAGACATCAGAAATATTTTGTGTTCAAGCTATCTCGAGTCCTATTATGAGATCACATCAGATATTAATATGGCCCACATTTTGGAGCCATTGTGTGAGTTGGACTCACAGAACCCATTGAAATCTTCTTGGAGAAGATCACTAACAGAGAACTATCCTTGGAAGTTAAATGATATTCATCTCAGATTACCATCCGGGAATTGTCGGGATTATGGATATCTCCTTAGTGGCTATTGGGCCAACAATGACAAAGTGCGCAATGCGCTTAAAGTGCGAAAGGGAACTAAAAAGAAATGGCAACGATGCACCTCCCATATGCCTTACAAGTTTGATATCTCTAGCAGCTTTCCATATCAAGTAAATCTCAGCAAAGAAGGCTATCGTTCACTAATTTACAGTGGGGATCATGACATGGTTGTTCCTTTCTTGGCAACTCAAGCATGGATAAGATCGTTAAACTACTCCATTGTCGACGATTGGAGGCCATGGTATACTAATGGACAAGTTGCAGGATACACAAGGACTTACTCCAATGCAATGACATTTGCAACTGTCAAGGGTGGAGGACACACAGCACCAGAATACAAGCCTCAAGAATGCCTTCACATGTATAGTAGGTGGATCTCTGAGAGACCCTTTTAG 1437 0.4099 MSIFSSTCLTDPRFICHGFLLPILLLLLQISSQLGDCGTIVKYLPGFQGPLPFLLETGYIGVGENDDVQSFYYFIESENNPREDPLMLWLTGGPGCSAFSGLVYEIGPLAFQVDEYDGGLPSLVYKPNSWTKVSSIVFVDLPVNTGFSYARTEFASQRSDSLSVNQAYQFLRKWIMDHPEFLNNKVYIAGDSYSGMHVPIIADEISKANERGLQPWINLQGYLMGNPKIDEKEKNYRIPFAHGMGLISDELHQSLQKHCKGEYVNVDIRNILCSSYLESYYEITSDINMAHILEPLCELDSQNPLKSSWRRSLTENYPWKLNDIHLRLPSGNCRDYGYLLSGYWANNDKVRNALKVRKGTKKKWQRCTSHMPYKFDISSSFPYQVNLSKEGYRSLIYSGDHDMVVPFLATQAWIRSLNYSIVDDWRPWYTNGQVAGYTRTYSNAMTFATVKGGGHTAPEYKPQECLHMYSRWISERPF 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00088 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 138 IPR001563 GO:0004185|GO:0006508
Arst10g00088 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 199 IPR001563 GO:0004185|GO:0006508
Arst10g00088 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 445 458 IPR001563 GO:0004185|GO:0006508
Arst10g00088 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 149 IPR001563 GO:0004185|GO:0006508
Arst10g00088 478 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 462 IPR001563 GO:0004185|GO:0006508
Arst10g00088 478 Gene3D alpha/beta hydrolase 38 308 IPR029058 -
Arst10g00088 478 FunFam Serine carboxypeptidase-like 11 35 478 - -
Arst10g00088 478 Pfam Serine carboxypeptidase 45 474 IPR001563 GO:0004185|GO:0006508
Arst10g00088 478 FunFam Carboxypeptidase 332 477 - -
Arst10g00088 478 Gene3D - 335 478 - -
Arst10g00088 478 FunFam Carboxypeptidase 380 475 - -
Arst10g00088 478 SUPERFAMILY alpha/beta-Hydrolases 41 477 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00088 Arst-Chr10 1030610 1046181 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00088 35 64 Calmodulin-binding Proteins AT2G22960 66.667 7.85e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00088 K16296 - gmx:100792006 669.463