Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00087 ATGTCAATATTTTCCTCAACGTGTTTAACTGATCCACGTTTCATTTGCCATGGATTCCTACTTCCCATTCTTCTATTGCTACTGCAGATTTCATCTCAACTTGGAGACTGTGGTACCATTGTTAAGTACCTTCCAGGATTCCAGGGACCACTTCCTTTTCTGCTTGAAACTGGGTATATAGGAGTAGGAGAAAATGATGATGTTCAGAGTTTCTACTATTTCATTGAGTCAGAGAACAATCCAAGAGAGGATCCTCTCATGCTCTGGCTCACTGGTGGTCCTGGCTGCTCTGCTTTTTCTGGCCTTGTCTATGAAATAGGACCACTTGCATTTCAAGTTGATGAATATGATGGGGGCCTCCCTAATTTGGTGTATAGGCCATACTCATGGACTAAGGCTAGTAGCATTATATTTGTAGATTTGCCAGTTAATACTGGCTTTTCATATGCTAGAACAGAATATGCTTCACAACGGAGCGATTCCTTGTCAGTCAATCAAGCCTATGAATTTTTTAGGAAGTGGTTAATGGATCATCCAACATTTCTCAAAAACAAAGTTTACATTGGTGGTGATTCATACTCTGGAAATGAACAAGGCCTCCAACCATTGATAAATCTCCAGGGATACCTGATGGGGAATCCTAAAATAGATGAAAAAGAAAAAAACTATCGAATCCCATTTGCTCATGGGATGGGACTCATTTCTGATGAACTGCACCAGTCACTGCAGAAACATTGTAAAGGAGAATATGTAAATGTAGACATCAGAAATATTTTGTGTTCAAGCTATCTCGAGTCCTATTATGAGATCACATCAGATATTAATATGGCCCACATTTTGGAGCCATTGTGTGAGTTGGACTCACAGAACCCATTGAAATCTTCTTGGAGAAGATCACTAACAGAGAACTATCCTTGGAAGTTAAATGATATTCATCTCAGATTACCATCCGGGAATTGTCGGGATTATGGATATCTCCTTAGTGGCTATTGGGCCAACAATGACAAAGTGCGCAATGCGCTTAAAGTGCGAAAGGGAACTAAAAAGAAATGGCAACGATGCACCTCCCATATGCCTTACAAGTTTGATATCTCTAGCAGCTTTCCATATCAAGTAAATCTCAGCAAAGAAGGCTATCGTTCACTAATTTACAGTGGGGATCATGACATGGTTGTTCCTTTCTTGGCAACTCAAGCATGGATAAGATCGTTAAACTACTCCATTGTCGACGATTGGAGGCCATGGTATACTAATGGACAAGTTGCAGGATACACAAGGACTTACTCCAATGCAATGACATTTGCAACTGTCAAGGGTGGTGGCCACACAGCTCCAGAGTATAAGCCTGAAGAATGCTTGAACATGTACAGTAGATGGATGTCTAGGATGGCTTTGTAG 1398 0.4077 MSIFSSTCLTDPRFICHGFLLPILLLLLQISSQLGDCGTIVKYLPGFQGPLPFLLETGYIGVGENDDVQSFYYFIESENNPREDPLMLWLTGGPGCSAFSGLVYEIGPLAFQVDEYDGGLPNLVYRPYSWTKASSIIFVDLPVNTGFSYARTEYASQRSDSLSVNQAYEFFRKWLMDHPTFLKNKVYIGGDSYSGNEQGLQPLINLQGYLMGNPKIDEKEKNYRIPFAHGMGLISDELHQSLQKHCKGEYVNVDIRNILCSSYLESYYEITSDINMAHILEPLCELDSQNPLKSSWRRSLTENYPWKLNDIHLRLPSGNCRDYGYLLSGYWANNDKVRNALKVRKGTKKKWQRCTSHMPYKFDISSSFPYQVNLSKEGYRSLIYSGDHDMVVPFLATQAWIRSLNYSIVDDWRPWYTNGQVAGYTRTYSNAMTFATVKGGGHTAPEYKPEECLNMYSRWMSRMAL 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00087 465 SUPERFAMILY alpha/beta-Hydrolases 41 463 IPR029058 -
Arst10g00087 465 Pfam Serine carboxypeptidase 45 461 IPR001563 GO:0004185|GO:0006508
Arst10g00087 465 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 449 IPR001563 GO:0004185|GO:0006508
Arst10g00087 465 Gene3D alpha/beta hydrolase 38 295 IPR029058 -
Arst10g00087 465 FunFam Carboxypeptidase 319 464 - -
Arst10g00087 465 Gene3D - 322 463 - -
Arst10g00087 465 FunFam Serine carboxypeptidase-like 11 35 465 - -
Arst10g00087 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 432 445 IPR001563 GO:0004185|GO:0006508
Arst10g00087 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 199 IPR001563 GO:0004185|GO:0006508
Arst10g00087 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 149 IPR001563 GO:0004185|GO:0006508
Arst10g00087 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 138 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00087 Arst-Chr10 1030610 1054191 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00087 35 64 Calmodulin-binding Proteins AT2G22960 66.667 7.29e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00087 K16296 - gmx:100792006 646.351