Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00086 ATGTCAATATTTTCCTCAACGTGTTTAACTGATCCACGTTTCATTTGCCATGGATTCCTACTTCCCATTCTTCTATTGCTACTGCAGATTTCATCTCAACTTGGAGACTGTGGTACCATTGTTAAGTACCTTCCAGGATTCCAGGGACCACTTCCTTTTCTGCTTGAAACTGGGTATATAGGAGTAGGAGAAAATGATGATGTTCAGAGTTTCTACTATTTCATTGAGTCAGAGAACAATCCAAGAGAGGATCCTCTCATGCTCTGGCTCACTGGTGGTCCTGGCTGCTCTGCTTTTTCTGGCCTTGTCTATGAAATAGGACCACTTGCATTTCAAGTTGATGAATATGATGGGGGCCTCCCTAATTTGGTGTATAGGCCATACTCATGGACTAAGGCTAGTAGCATTATATTTGTAGATTTGCCAGTTAATACTGGCTTTTCATATGCTAGAACAGAATATGCTTCACAACGGAGCGATTCCTTGTCAGTCAATCAAGCCTATGAATTTTTTAGGAAGTGGTTAATGGATCATCCAACATTTCTCAAAAACAAAGTTTACATTGGTGGTGATTCATACTCTGGTATTCTTATTCCTATAATTGCTCATGAAATTTTAAAAGGAAATGAACAAGGCCTCCAACCATTGATAAATCTCCAGGGATACCTGATGGGGAATCCTAAAATAGATGAAAAAGAAAAAAACTATCGAATCCCATTTGCTCATGGGATGGGACTCATTTCTGATGAACTGCACCAGTCACTGCAGAAACATTGTAAAGGAGAATATGTAAATGTAGACATCAGAAATATTTTGTGTTCAAGCTATCTCGAGTCCTATTATGAGATCACATCAGATATTAATATGGCCCACATTTTGGAGCCATTGTGTGAGTTGGACTCACAGAACCCATTGAAATCTTCTTGGAGAAGATCACTAACAGAGAACTATCCTTGGAAGTTAAATGATATTCATCTCAGATTACCATCCGGGAATTGTCGGGATTATGGATATCTCCTTAGTGGCTATTGGGCCAACAATGACAAAGTGCGCAATGCGCTTAAAGTGCGAAAGGGAACTAAAAAGAAATGGCAACGATGCACCTCCCATATGCCTTACAAGTTTGATATCTCTAGCAGCTTTCCATATCAAGTAAATCTCAGCAAAGAAGGCTATCGTTCACTAATTTACAGTGGGGATCATGACATGGTTGTTCCTTTCTTGGCAACTCAAGCATGGATAAGATCGTTAAACTACTCCATTGTCGACGATTGGAGGCCATGGTATACTAATGGACAAGTTGCAGGATACACAAGGACTTACTCCAATGCAATGACATTTGCAACTGTCAAGGGTGGTGGCCACACAGCTCCAGAGTATAAGCCTGAAGAATGCTTGAACATGTACAGTAGATGGATGTCTAGGATGGCTTTGTAG 1437 0.4029 MSIFSSTCLTDPRFICHGFLLPILLLLLQISSQLGDCGTIVKYLPGFQGPLPFLLETGYIGVGENDDVQSFYYFIESENNPREDPLMLWLTGGPGCSAFSGLVYEIGPLAFQVDEYDGGLPNLVYRPYSWTKASSIIFVDLPVNTGFSYARTEYASQRSDSLSVNQAYEFFRKWLMDHPTFLKNKVYIGGDSYSGILIPIIAHEILKGNEQGLQPLINLQGYLMGNPKIDEKEKNYRIPFAHGMGLISDELHQSLQKHCKGEYVNVDIRNILCSSYLESYYEITSDINMAHILEPLCELDSQNPLKSSWRRSLTENYPWKLNDIHLRLPSGNCRDYGYLLSGYWANNDKVRNALKVRKGTKKKWQRCTSHMPYKFDISSSFPYQVNLSKEGYRSLIYSGDHDMVVPFLATQAWIRSLNYSIVDDWRPWYTNGQVAGYTRTYSNAMTFATVKGGGHTAPEYKPEECLNMYSRWMSRMAL 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00086 478 Gene3D - 335 476 - -
Arst10g00086 478 Gene3D alpha/beta hydrolase 38 308 IPR029058 -
Arst10g00086 478 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 462 IPR001563 GO:0004185|GO:0006508
Arst10g00086 478 Pfam Serine carboxypeptidase 45 474 IPR001563 GO:0004185|GO:0006508
Arst10g00086 478 FunFam Carboxypeptidase 380 475 - -
Arst10g00086 478 SUPERFAMILY alpha/beta-Hydrolases 41 476 IPR029058 -
Arst10g00086 478 FunFam Serine carboxypeptidase-like 11 35 478 - -
Arst10g00086 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 138 IPR001563 GO:0004185|GO:0006508
Arst10g00086 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 199 IPR001563 GO:0004185|GO:0006508
Arst10g00086 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 445 458 IPR001563 GO:0004185|GO:0006508
Arst10g00086 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 149 IPR001563 GO:0004185|GO:0006508
Arst10g00086 478 FunFam Carboxypeptidase 332 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00086 Arst-Chr10 1030610 1054191 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00086 35 64 Calmodulin-binding Proteins AT2G22960 66.667 8.15e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00086 K16296 - gmx:100792006 668.692