Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00083 ATGATCGTTGGAACACTCTCTGCAATCGGCAATGGCATGTCTCAGCCTCTAATGACTCTTATCTTCGGCAAGCTTATCAACACTTTCGGTTCCGGTGATCCATCTCATATCGTCAAGGAAGTTTCAAAGGTTGCATTACTGTTTGTTTACCTGGCTATTTGGTCTGGAATTACATCGTTTCTTCAGGTATCTTGTTGGATGGTGACAGGAGAAAGACAAGCAGCTAGGATCCGTGGTTTGTACTTGAAAACTATATTGAAGCAAGACATTGCCTTCTTTGACACTGAAACAACAACCGGAGAGGTCATTGGTAGAATGTCTGGCGACACTATTCTCATTCAAGATGCCATGGGAGAAAAGGTTGGGAAGTTTATTCAACTTGGTTCAACCTTTGTTGGTGGCTTTGTGATTGCCTTCATAAAAGGATGGAGGCTCGCTGTAGTTCTTCTTGCATGTATACCATGTGTGGTGGTTGCTGGTGGAACTATGGCCATGATGATGGCTAAAATGGCTAGCCGAGGACAGATTGCGTATGCAGAAGCAGGGAATGTTGTTGAACAAACAGTTGGAGCCATTAGAACTGTTGCATCTTTTACTGGGGAGAAGAAAGCAATAGAAAAGTACAATATTAAGTTAAAAGTCGCATATACTACAATGGTTCAACAAGGAATGGCATCAGGTATAGGACTTGGAGCACTTCTGTTCATTATCTTCAGCACCTATGGGCTTGCCATGTGGTATGGTTCCAAGCTCATCATCGAGAGGGGATACAATGGTGGAACAGTAATCAATGTAATCATTGCTCTTATGACCGGTGGAATGTCACTTGGTCAGACATCTCCTTGCGTAAATGCATTTGCAGCAGGCAGAGCAGCAGCATTTAAGATGTTTGAGACAATAGAAAGGAAACCAAAAATTGATGCATATGACACAAACGGTGTTGTCTTGGAAGATATTAAGGGAGATATTGAACTCAAAGATGTTTACTTCAGATATCCTGCTAGGCCAGATGTGCAGATCTTTGCTGGATTCTCATTATGTGTTCCAAATGGCACAACTGCTGCTATGGTTGGTCAAAGTGGCAGTGGCAAATCAACTGTGATAAGCTTATTGGAAAGATTCTATGATCCTGATGCTGGAGAAGTACTCATAGATGGGGTCAACTTAAAGGATTTCCAACTTAGATGGATAAGAGAACAAATTGGTTTGGTTAGTCAAGAACCTACTCTTTTTACAGCTAGTATCAAAGACAACATTGCTTATGGAAAAGAAGGTGCAACTGACGAGGAAATAATGACAGCAATAACACTTGCCAATGCCAAAAAATTCATTGACAAGTTGCCACAGGGAATTGACACAATGGCAGGGGAGCATGGCACGCAACTTTCTGGTGGCCAAAAGCAAAGAATTGCCATAGCAAGGGCAATTTTGAAGAATCCTAAAATTCTGCTTTTGGATGAAGCCACAAGTGCATTGGATGCTGAATCTGAACGTGTTGTTCAAGAAGCCTTAGAGAAAGCCATGTCAAATAGGACTACCGTAGTTGTTGCACATCGTTTAACAACTATTAGGAATGCTGACACTATTGCAGTGGTTCAACAGGGGAAAATCGTAGAACAAGGGTCTCATGATGAGTTAATCAAAGACCCTGAGGGTCCTTATTCTCAGCTCATTCGCTTACAAGAAGGACAAAAAAATGAGGATGAAGATAGCAGAATTTTTGAAGCAGATTTAGATAGAGCTTCCTTCCACAAACCATCGAATTTGAGATCATTAAGCCAAGGTTCATCAGGGAGCAGGCGTTCTCATTCAAATAACATTGTTGCCCCTTTAACTTCACAAAGTTCAGTACAAGAAATAGGTGATGGCGACGTTGAAACTGGTGAACGAAGTGATAAGAAGCGCAAAAGCGTTTCAATGAAACGTTTGGCCTATTTGAACAAGCCTGAACTTCCTGTGTTACTGCTTGGAGGCATCGCTGCAGCAGTGCATGGAGTTATATTCCCCATATTTGGCCTATTGCTTTCATCAGCCATCAAAATGTTCTTTGAGCCTCCACATCAGCTAAGGAAGGATTCTAGGTTCTGGTCACTTTTGTATGTTGGTTTGGGTTTGCTCACTCTCATGGCTATACCAGTGCAGAATTACTTCTTTGGGATTGCTGGTGGAAAACTCATTGAAAGGATTCGCTCGTTGACATTCCAGAAGGTTGTGCACCAAGAAATCAGTTGGTTCGATCATCCTGAAAACGCAAGTGGTGCAATCGGCGCAAGGCTATCTACTGATGCTTCAACAGTGAGGAGTCTTGTCGGTGACACATTGGCCCTCATTGTGCAAAACATATCCACAATCATAGCAGGCCTAATTATAGCTTTCACTGCTAATTGGATTCTAGCTTTCGTAGTCCTGGCTGTGTCACCATGTGTTCTCATCCAAGGATTCCTTCAGATGAAATTTCTAAGAGGGTTCAGTGCTGATGCCAAGTTGATGTATGAAGAGGCAAGTCAAGTGGCAAATGATGCTGTTGGTAGCATTAGAACCGTTGCATCGTTTTGTGCAGAACCAAAGGTGATGGATATGTATAGGAAGAAGTGTATAGGACCAGAAAAACAAGGTGTAAGGTTGGGGCTTGTTAGCGGAGCAGGATTTGGTTTCTCATTTGTTGCTCTATACTGCACAAATGCCTTTTGTTTCTACATAGGATCTGTTCTTGTGCAGCATGGGGAAGCAACATTTTCAGAGGTTTTCAGGGTTTTCTTTTGCCTCACAATGACAGCAATCGGCGTTTCCCAGACTAGTGCCTTGGCACCAGACACAAATAAGGCCAAGGATTCCGCAGCTTCAATATTTGAAATCCTTGATAGCAAACCAATGATTGACTCCAGCAGCAATGAGGGAATGACACTAGACAATGTTGTTGGTGCCATTGAACTTCAAAATGTCAGCTTTAGTTACCCAACAAGGCCTGACATCCAAATTTTCAAAGATTTATGTCTAAGCATCCCTGCTGGGAAGACTGTTGCATTGGTTGGAGAAAGTGGAAGTGGAAAATCAACAGTGATCAGCCTCTTAGAAAGATTCTACAACCCTGATTCCGGACAGATACTCCTTGATGAAGTGGACATCACTAAGTTCAGAATAAGCTGGTTGAGGCAACAAATGGGTTTGGTTGGTCAAGAGCCAATTCTCTTCAATGAAAGCATCCGTGACAACATAGCATATGGCAAAGAAGGAGGTGCCACTGAGGAAGAGATCATTGCAGCAGCAGAAGCAGCCAATGCACACAAGTTTATAAGCTCTCTTCCGAAAGGATATGACACTACTGTTGGTGAAAGAGGGACACAACTCTCTGGTGGACAGAAGCAGCGTATTGCCATTGCAAGAGCCATGCTTAAACAGCCTAAGATATTATTGCTCGATGAAGCAACAAGTGCACTTGATGCTGAATCAGAGCGTGTGGTTCAAGAGGCTCTAGATAGAGTGAGTGTGGACAGAACTACTGTGGTGGTAGCTCATAGGTTTTCAACAATCAAAGGTGCTGATATCATTGCTGTAGTGAAGAATGGAGTGATTGCTGAGAAGGGAAGACATGATTCTTTGATGAAGATTGAGGGTGGCACTTATGCTTCCTTGGTAGCTCTACATATGAGTGCATCCTAA 3660 0.4268 MIVGTLSAIGNGMSQPLMTLIFGKLINTFGSGDPSHIVKEVSKVALLFVYLAIWSGITSFLQVSCWMVTGERQAARIRGLYLKTILKQDIAFFDTETTTGEVIGRMSGDTILIQDAMGEKVGKFIQLGSTFVGGFVIAFIKGWRLAVVLLACIPCVVVAGGTMAMMMAKMASRGQIAYAEAGNVVEQTVGAIRTVASFTGEKKAIEKYNIKLKVAYTTMVQQGMASGIGLGALLFIIFSTYGLAMWYGSKLIIERGYNGGTVINVIIALMTGGMSLGQTSPCVNAFAAGRAAAFKMFETIERKPKIDAYDTNGVVLEDIKGDIELKDVYFRYPARPDVQIFAGFSLCVPNGTTAAMVGQSGSGKSTVISLLERFYDPDAGEVLIDGVNLKDFQLRWIREQIGLVSQEPTLFTASIKDNIAYGKEGATDEEIMTAITLANAKKFIDKLPQGIDTMAGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERVVQEALEKAMSNRTTVVVAHRLTTIRNADTIAVVQQGKIVEQGSHDELIKDPEGPYSQLIRLQEGQKNEDEDSRIFEADLDRASFHKPSNLRSLSQGSSGSRRSHSNNIVAPLTSQSSVQEIGDGDVETGERSDKKRKSVSMKRLAYLNKPELPVLLLGGIAAAVHGVIFPIFGLLLSSAIKMFFEPPHQLRKDSRFWSLLYVGLGLLTLMAIPVQNYFFGIAGGKLIERIRSLTFQKVVHQEISWFDHPENASGAIGARLSTDASTVRSLVGDTLALIVQNISTIIAGLIIAFTANWILAFVVLAVSPCVLIQGFLQMKFLRGFSADAKLMYEEASQVANDAVGSIRTVASFCAEPKVMDMYRKKCIGPEKQGVRLGLVSGAGFGFSFVALYCTNAFCFYIGSVLVQHGEATFSEVFRVFFCLTMTAIGVSQTSALAPDTNKAKDSAASIFEILDSKPMIDSSSNEGMTLDNVVGAIELQNVSFSYPTRPDIQIFKDLCLSIPAGKTVALVGESGSGKSTVISLLERFYNPDSGQILLDEVDITKFRISWLRQQMGLVGQEPILFNESIRDNIAYGKEGGATEEEIIAAAEAANAHKFISSLPKGYDTTVGERGTQLSGGQKQRIAIARAMLKQPKILLLDEATSALDAESERVVQEALDRVSVDRTTVVVAHRFSTIKGADIIAVVKNGVIAEKGRHDSLMKIEGGTYASLVALHMSAS 1219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00083 1219 Gene3D ABC transporter type 1, transmembrane domain 57 950 IPR036640 GO:0005524|GO:0016020
Arst10g00083 1219 Gene3D ABC transporter type 1, transmembrane domain 57 950 IPR036640 GO:0005524|GO:0016020
Arst10g00083 1219 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 976 1213 IPR003439 GO:0005524
Arst10g00083 1219 FunFam ABC transporter B family member 1 313 562 - -
Arst10g00083 1219 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 2 288 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g00083 1219 PANTHER ABC TRANSPORTER B FAMILY 1 562 IPR039421 -
Arst10g00083 1219 PANTHER ABC TRANSPORTER B FAMILY 1 562 IPR039421 -
Arst10g00083 1219 ProSitePatterns ABC transporters family signature. 1116 1130 IPR017871 GO:0005524|GO:0016887
Arst10g00083 1219 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 323 559 IPR003439 GO:0005524
Arst10g00083 1219 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 965 1214 IPR027417 -
Arst10g00083 1219 Pfam ABC transporter 995 1144 IPR003439 GO:0005524
Arst10g00083 1219 MobiDBLite consensus disorder prediction 585 613 - -
Arst10g00083 1219 MobiDBLite consensus disorder prediction 586 613 - -
Arst10g00083 1219 Pfam ABC transporter transmembrane region 1 273 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g00083 1219 Pfam ABC transporter transmembrane region 654 926 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g00083 1219 SUPERFAMILY ABC transporter transmembrane region 1 307 IPR036640 GO:0005524|GO:0016020
Arst10g00083 1219 SMART AAA_5 1003 1196 IPR003593 GO:0016887
Arst10g00083 1219 SMART AAA_5 350 536 IPR003593 GO:0016887
Arst10g00083 1219 FunFam ABC transporter B family member 1 634 942 - -
Arst10g00083 1219 Pfam ABC transporter 344 490 IPR003439 GO:0005524
Arst10g00083 1219 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 312 561 IPR027417 -
Arst10g00083 1219 CDD ABC_MTABC3_MDL1_MDL2 976 1212 - -
Arst10g00083 1219 FunFam ABC transporter B family member 1 966 1216 - -
Arst10g00083 1219 CDD ABC_6TM_Pgp_ABCB1_D1_like 1 284 - -
Arst10g00083 1219 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 655 941 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g00083 1219 SUPERFAMILY ABC transporter transmembrane region 636 960 IPR036640 GO:0005524|GO:0016020
Arst10g00083 1219 CDD ABC_MTABC3_MDL1_MDL2 323 561 - -
Arst10g00083 1219 ProSitePatterns ABC transporters family signature. 462 476 IPR017871 GO:0005524|GO:0016887
Arst10g00083 1219 CDD ABC_6TM_Pgp_ABCB1_D2_like 644 959 - -
Arst10g00083 1219 FunFam ABC transporter B family member 9 1 318 - -
Arst10g00083 1219 Gene3D - 321 577 IPR027417 -
Arst10g00083 1219 Gene3D - 321 577 IPR027417 -
Arst10g00083 1219 Gene3D - 966 1218 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00083 Arst-Chr10 1012598 1018838 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00083 1 1215 Calmodulin-binding Proteins AT2G36910 45.617 0.0 1044
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00083 K05658 - gmx:100801771 1864.35