LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst10g00047	ATGCTGGAAGCAAACAATTTTTCTGGAGTTGTTCCACCTGAACTTGGGAAGCTGATCAACTTGCAGACCTTGGTACTGTCATCAAATCAGTTGACCGGGAACTTACCATCGGCACTTGCTGGGCTGCAAAATTTAACCGACTTTAGGATAAGTAGTAACAACTTTACAGGAACCATACCTGATTTCATAAAGAACTGGCAATTTCTCCAAAGACTAGAAATGCATGGAAGTGGACTAGAAGGACCGATTCCATCAAGTATATCTCTATTGAAGAACTTACTTCAGTTAAGAATCAGTGATATAAAAAGTCCTAGCCAGGTTTTTCCTTCACTGCAGAGCATGACAGCACTAACTACATTGGTCTTAAGGAACTGTAACCTGTCTGGGGAGATACCTTCATACATATGGACCTTGACAAATCTAGCAACTTTGGATGTCAGTTTTAACAAGCTAGTTGGGAAAATTCTCGAAGTCATTAATGTAAAGCGTATGAGATACATCTACCTAACAGGTAACATGCTCAGTGGAAATGTACCAAAGTCAATACTGAAGGATGGAAGTAGCATTGATCTCTCTTACAACAACTTTACTTGGCAAGGGCCTGAGCAACCTGCTTGTCAGGAAGACATTAGGAACTTAAATGTGAATTTGTTCAGAAGCTCAATGATGAAGAATAAGTTAGAGGAATATGTGCCTTGCAAAAGTAACTTCAATTGTCCACGATATTCAAGTTGCTTACATGTCAATTGTGGTGGAAAGGATATACAAGTAAAAGATAATACAGGAAACAGCCTCTATTTCGGAGATGGAGAAGTTGCAGGTGGTACTGCAACATATTTCTATAGCTCCAGTGATCAATGGGGATTTAGTAGCACTGGGGACTTTCTGGATGATTTCGAAGCTCAGAACATACGTTACACTGTATCTCTATCATCTTCAAATATGTCTGAATTGTACACAACAGCACGCATATCTCCAATTTCACTCACTTACTTCCATAATTGCATGGAAAATGGGAACTATACTGTAAATCTTCACTTTGCTGAAATACAGTTTTCAAATGATAACACATATAAAAGCCTTGGGAAGCGTATATTTGATATCTATGTTCAGGAAAAATTGATTAGAAACGATTTTGATATAGAAAATGAGACACATGCTGCTGTAAAACCACTGGTAGTGCCTATATACAATGTCAGCATCACAAATAATGTTTTGGAGATTAGATTCTACTGGGCCGGGAAAGGAACAACTCGAATACCTGATTATGGAGTTTATGGTCCCCTTGTATCAGCATTGTCTGTTGTTTCTGACTCTAGAACTTGCTCAAACGATGGAAAGAAGGTTCCTGTTTCTTTAATAATTGCAAGTGTAGCTGGGGCTCTATGCTTCATTCTTCTTTTGTTTGGATTCATTTGGTGGAAAGGCTTCTTCAGAAGAAAATTGCGACGGAAAGGTACAAAAGGTGGAGATATTCAGTCAGGAACTTTTAGCTTAGAGCAGCTGAGAGCAGCCACTGATGACTTTTCTTCTGTTAACAAGATTGGAGAAGGCGGTTTCGGTCCTGTATACAAGGGTCAACTGCCTGATGGTACTGTTATAGCAGTTAAGCAACTATCATCAAAGTCAAGGCAAGGAAATCGCGAATTCTTAAATGAAATAGGCTTGATATCTTGTTTGCAACATCCCAACCTTGTAAAGCTTTATGGATACTGCACAGAAGGGGAACAACTTCTATTAGTATATGAGTACCTGGAAAATAATAGTCTTTCCCGTGCTTTATTTGGTAGTGAAACCAATCATCTTAAGATAGACTGGCCAACAAGGTTTAGGATCTGCATTGGCATAGCAAAGGGTCTGGCATTTCTCCATGAAGAATCAAGATTCAAGATAGTTCACAGAGATATCAAGGCTTCTAATGTGTTACTTGATGGTGAACTAAATCCTAAGATATCTGACTTTGGATTGGCTAAGCTTCATGAAGATGAGAAGACACATATAAGTACCCGAGTTGCCGGCACTATTGGATATATGGCACCAGAATATGCACTATGGGGCTATCTTACATACAAAGCTGATGTTTACAGCTTTGGGGTTGTGGCCTTAGAAATTGTTAGCGGAAAAAGCAACAACAATTATTTACCAGATGATGAAAGCGTTTGCCTTTTGGATTGGGCTTGCCAATTGCACAAAAAACAGAACTTGGTTAAACTGATTGATGAAAGCTTGGGGCCAGAGGACATTATAACAGAAGCAGAAATGGTGGTAAAAGTATCACTACTATGCACAAATGCATCACCATCACTCAGACCTACAATGTCTGAGGTTGTGAATATGCTTGAAGGTCGTGCAGCTATTCCGTATATGGTTCCAGATCCAAGTTCCTGCAATGAGGATTTGAGGTTTAAAGCTTTAAGAGACTTCCATCAACATAAATCAAAACTGGGTTTGAGTGTAAACCAGACCCCAAATTCAGCAACACCACATACATTCAGCTCAATATCTGGTGATAATAATTACACAAGTTCTATTGAGGAATTAGCTCATTCTGAGATTTCCCCTTTATCAAGTTAA	2574	0.3901	MLEANNFSGVVPPELGKLINLQTLVLSSNQLTGNLPSALAGLQNLTDFRISSNNFTGTIPDFIKNWQFLQRLEMHGSGLEGPIPSSISLLKNLLQLRISDIKSPSQVFPSLQSMTALTTLVLRNCNLSGEIPSYIWTLTNLATLDVSFNKLVGKILEVINVKRMRYIYLTGNMLSGNVPKSILKDGSSIDLSYNNFTWQGPEQPACQEDIRNLNVNLFRSSMMKNKLEEYVPCKSNFNCPRYSSCLHVNCGGKDIQVKDNTGNSLYFGDGEVAGGTATYFYSSSDQWGFSSTGDFLDDFEAQNIRYTVSLSSSNMSELYTTARISPISLTYFHNCMENGNYTVNLHFAEIQFSNDNTYKSLGKRIFDIYVQEKLIRNDFDIENETHAAVKPLVVPIYNVSITNNVLEIRFYWAGKGTTRIPDYGVYGPLVSALSVVSDSRTCSNDGKKVPVSLIIASVAGALCFILLLFGFIWWKGFFRRKLRRKGTKGGDIQSGTFSLEQLRAATDDFSSVNKIGEGGFGPVYKGQLPDGTVIAVKQLSSKSRQGNREFLNEIGLISCLQHPNLVKLYGYCTEGEQLLLVYEYLENNSLSRALFGSETNHLKIDWPTRFRICIGIAKGLAFLHEESRFKIVHRDIKASNVLLDGELNPKISDFGLAKLHEDEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKSNNNYLPDDESVCLLDWACQLHKKQNLVKLIDESLGPEDIITEAEMVVKVSLLCTNASPSLRPTMSEVVNMLEGRAAIPYMVPDPSSCNEDLRFKALRDFHQHKSKLGLSVNQTPNSATPHTFSSISGDNNYTSSIEELAHSEISPLSS	857

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst10g00047	857	Pfam	Protein tyrosine and serine/threonine kinase	512	780	IPR001245	GO:0004672\|GO:0006468
	Arst10g00047	857	FunFam	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase	243	438	-	-
	Arst10g00047	857	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	2	811	-	-
	Arst10g00047	857	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	631	643	IPR008271	GO:0004672\|GO:0006468
	Arst10g00047	857	SUPERFAMILY	Protein kinase-like (PK-like)	494	781	IPR011009	-
	Arst10g00047	857	ProSiteProfiles	Protein kinase domain profile.	509	789	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst10g00047	857	SMART	serkin_6	509	789	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst10g00047	857	CDD	STKc_IRAK	515	782	-	-
	Arst10g00047	857	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	585	791	-	-
	Arst10g00047	857	FunFam	Putative LRR receptor-like serine/threonine-protein kinase isoform A	35	102	-	-
	Arst10g00047	857	Gene3D	Transferase(Phosphotransferase) domain 1	585	787	-	-
	Arst10g00047	857	Gene3D	Ribonuclease Inhibitor	1	236	IPR032675	-
	Arst10g00047	857	Gene3D	Phosphorylase Kinase; domain 1	480	584	-	-
	Arst10g00047	857	FunFam	Probable LRR receptor-like serine/threonine-protein kinase RFK1	104	226	-	-
	Arst10g00047	857	FunFam	probable LRR receptor-like serine/threonine-protein kinase At1g53430	479	584	-	-
	Arst10g00047	857	SUPERFAMILY	L domain-like	3	202	-	-
	Arst10g00047	857	Pfam	Malectin domain	245	433	IPR021720	-
	Arst10g00047	857	Gene3D	-	243	440	-	-
	Arst10g00047	857	MobiDBLite	consensus disorder prediction	816	835	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst10g00047	Arst-Chr10	747519	753238	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst10g00047	2	675	Receptor kinase-like Gene Family	AT1G29750	59.407	0.0	835

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Arst10g00047		PK_Tyr_Ser-Thr	5.1e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst10g00047	-		-	qsa:O6P43_032037	1221.07