Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00046 ATGCAACTTCTCAACTTCTTTGGCTTTTTACTTGTTACACTTTGTTGCTTCCAGTTGCTGAGAATATCCGAATCAAAATTGCCAAAAGAAGAAGTTGAAGCTCTCAAAGAAATTACCAGTACAATGGGGGCGGTCTATTGGGAGTTTGATAATGATTCCTGTGACATTATAAGGGTTGGACTAACGCGAGAACCTCCTGACGAATCGGAGAGAAGCATTGTTTGTGACTGCAGTTTTGAAAATAGTACTGTCTGTCATGTTACTAAGATAACCCTCAAGCGCCTTAGTCTACCTGGAGCACTCCCACCTCAACTGGTCAAGCTACCTTTTCTTCAAGATATAGATTTTGCATACAATTGTTTAAATGGCACAATTCCAAAGGAATGGGCTTCAATGAATTTAACTTCCATCTCTCTTCTTGTGAATCGCTTGTCAGGGGAAATTCCAAAGCATCTAGGAAATATTACTACTCTCACATACCTGATGCTGGAAGCAAACAATTTTTCTGGAGTTGTTCCACCTGAACTTGGGAAGCTGATCAACTTGCAGACCTTGGTACTGTCATCAAATCAGTTGACCGGGAACTTACCATCGGCACTTGCTGGGCTGCAAAATTTAACCGACTTTAGGATAAGTAGTAACAACTTTACAGGAACCATACCTGATTTCATAAAGAACTGGCAATTTCTCCAAAGACTAGAAATGCATGGAAGTGGACTAGAAGGACCGATTCCATCAAGTATATCTCTATTGAAGAACTTACTTCAGTTAAGAATCAGTGATATAAAAAGTCCTAGCCAGGTTTTTCCTTCACTGCAGAGCATGACAGCACTAACTACATTGGTCTTAAGGAACTGTAACCTGTCTGGGGAGATACCTTCATACATATGGACCTTGACAAATCTAGCAACTTTGGATGTCAGTTTTAACAAGCTAGTTGGGAAAATTCTCGAAGTCATTAATGTAAAGCGTATGAGATACATCTACCTAACAGGTAACATGCTCAGTGGAAATGTACCAAAGTCAATACTGAAGGATGGAAGTAGCATTGATCTCTCTTACAACAACTTTACTTGGCAAGGGCCTGAGCAACCTGCTTGTCAGGAAGACATGAACTTAAATGTGAATTTGTTCAGAAGCTCAATGATGAAGAATAAGTTAGAGGAATATGTGCCTTGCAAAAGTAACTTCAATTGTCCACGATATTCAAGTTGCTTACATGTCAATTGTGGTGGAAAGGATATACAAGTAAAAGATAATACAGGAAACAGCCTCTATTTCGGAGATGGAGAAGTTGCAGGTGGTACTGCAACATATTTCTATAGCTCCAGTGATCAATGGGGATTTAGTAGCACTGGGGACTTTCTGGATGATTTCGAAGCTCAGAACATACGTTACACTGTATCTCTATCATCTTCAAATATGTCTGAATTGTACACAACAGCACGCATATCTCCAATTTCACTCACTTACTTCCATAATTGCATGGAAAATGGGAACTATACTGTAAATCTTCACTTTGCTGAAATACAGTTTTCAAATGATAACACATATAAAAGCCTTGGGAAGCGTATATTTGATATCTATGTTCAGGAAAAATTGATTAGAAACGATTTTGATATAGAAAATGAGACACATGCTGCTGTAAAACCACTGGTAGTGCCTATATACAATGTCAGCATCACAAATAATGTTTTGGAGATTAGATTCTACTGGGCCGGGAAAGGAACAACTCGAATACCTGATTATGGAGTTTATGGTCCCCTTGTATCAGCATTGTCTGTTGTTTCTGACTCTAGAACTTGCTCAAACGATGGAAAGAAGGTTCCTGTTTCTTTAATAATTGCAAGTGTAGCTGGGGCTCTATGCTTCATTCTTCTTTTGTTTGGATTCATTTGGTGGAAAGGCTTCTTCAGAAGAAAATTGCGACGGAAAGGTACAAAAGGTGGAGATATTCAGTCAGGAACTTTTAGCTTAGAGCAGCTGAGAGCAGCCACTGATGACTTTTCTTCTGTTAACAAGATTGGAGAAGGCGGTTTCGGTCCTGTATACAAGGGTCAACTGCCTGATGGTACTGTTATAGCAGTTAAGCAACTATCATCAAAGTCAAGGCAAGGAAATCGCGAATTCTTAAATGAAATAGGCTTGATATCTTGTTTGCAACATCCCAACCTTGTAAAGCTTTATGGATACTGCACAGAAGGGGAACAACTTCTATTAGTATATGAGTACCTGGAAAATAATAGTCTTTCCCGTGCTTTATTTGGTAGTGAAACCAATCATCTTAAGATAGACTGGCCAACAAGGTTTAGGATCTGCATTGGCATAGCAAAGGGTCTGGCATTTCTCCATGAAGAATCAAGATTCAAGATAGTTCACAGAGATATCAAGGCTTCTAATGTGTTACTTGATGGTGAACTAAATCCTAAGATATCTGACTTTGGATTGGCTAAGCTTCATGAAGATGAGAAGACACATATAAGTACCCGAGTTGCCGGCACTATTGGATATATGGCACCAGAATATGCACTATGGGGCTATCTTACATACAAAGCTGATGTTTACAGCTTTGGGGTTGTGGCCTTAGAAATTGTTAGCGGAAAAAGCAACAACAATTATTTACCAGATGATGAAAGCGTTTGCCTTTTGGATTGGGCTTGCCAATTGCACAAAAAACAGAACTTGGTTAAACTGATTGATGAAAGCTTGGGGCCAGAGGACATTATAACAGAAGCAGAAATGGTGGTAAAAGTATCACTACTATGCACAAATGCATCACCATCACTCAGACCTACAATGTCTGAGGTTGTGAATATGCTTGAAGGTCGTGCAGCTATTCCGTATATGGTTCCAGATCCAAGTTCCTGCAATGAGGATTTGAGGTTTAAAGCTTTAAGAGACTTCCATCAACATAAATCAAAACTGGGTTTGAGTGTAAACCAGACCCCAAATTCAGCAACACCACATACATTCAGCTCAATATCTGGTGATAATAATTACACAAGTTCTATTGAGGAATTAGCTCATTCTGAGATTTCCCCTTTATCAAGTTAA 3054 0.3916 MQLLNFFGFLLVTLCCFQLLRISESKLPKEEVEALKEITSTMGAVYWEFDNDSCDIIRVGLTREPPDESERSIVCDCSFENSTVCHVTKITLKRLSLPGALPPQLVKLPFLQDIDFAYNCLNGTIPKEWASMNLTSISLLVNRLSGEIPKHLGNITTLTYLMLEANNFSGVVPPELGKLINLQTLVLSSNQLTGNLPSALAGLQNLTDFRISSNNFTGTIPDFIKNWQFLQRLEMHGSGLEGPIPSSISLLKNLLQLRISDIKSPSQVFPSLQSMTALTTLVLRNCNLSGEIPSYIWTLTNLATLDVSFNKLVGKILEVINVKRMRYIYLTGNMLSGNVPKSILKDGSSIDLSYNNFTWQGPEQPACQEDMNLNVNLFRSSMMKNKLEEYVPCKSNFNCPRYSSCLHVNCGGKDIQVKDNTGNSLYFGDGEVAGGTATYFYSSSDQWGFSSTGDFLDDFEAQNIRYTVSLSSSNMSELYTTARISPISLTYFHNCMENGNYTVNLHFAEIQFSNDNTYKSLGKRIFDIYVQEKLIRNDFDIENETHAAVKPLVVPIYNVSITNNVLEIRFYWAGKGTTRIPDYGVYGPLVSALSVVSDSRTCSNDGKKVPVSLIIASVAGALCFILLLFGFIWWKGFFRRKLRRKGTKGGDIQSGTFSLEQLRAATDDFSSVNKIGEGGFGPVYKGQLPDGTVIAVKQLSSKSRQGNREFLNEIGLISCLQHPNLVKLYGYCTEGEQLLLVYEYLENNSLSRALFGSETNHLKIDWPTRFRICIGIAKGLAFLHEESRFKIVHRDIKASNVLLDGELNPKISDFGLAKLHEDEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKSNNNYLPDDESVCLLDWACQLHKKQNLVKLIDESLGPEDIITEAEMVVKVSLLCTNASPSLRPTMSEVVNMLEGRAAIPYMVPDPSSCNEDLRFKALRDFHQHKSKLGLSVNQTPNSATPHTFSSISGDNNYTSSIEELAHSEISPLSS 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00046 1017 FunFam Putative LRR receptor-like serine/threonine-protein kinase 745 951 - -
Arst10g00046 1017 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 265 386 - -
Arst10g00046 1017 Pfam Malectin domain 405 593 IPR021720 -
Arst10g00046 1017 SMART serkin_6 669 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00046 1017 Gene3D Ribonuclease Inhibitor 200 403 IPR032675 -
Arst10g00046 1017 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 403 598 - -
Arst10g00046 1017 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 639 744 - -
Arst10g00046 1017 CDD STKc_IRAK 675 942 - -
Arst10g00046 1017 Gene3D Ribonuclease Inhibitor 47 199 IPR032675 -
Arst10g00046 1017 Gene3D - 404 600 - -
Arst10g00046 1017 Pfam Protein tyrosine and serine/threonine kinase 672 940 IPR001245 GO:0004672|GO:0006468
Arst10g00046 1017 SUPERFAMILY L domain-like 81 341 - -
Arst10g00046 1017 Gene3D Transferase(Phosphotransferase) domain 1 745 947 - -
Arst10g00046 1017 Gene3D Phosphorylase Kinase; domain 1 640 744 - -
Arst10g00046 1017 SUPERFAMILY Protein kinase-like (PK-like) 654 941 IPR011009 -
Arst10g00046 1017 ProSitePatterns Serine/Threonine protein kinases active-site signature. 791 803 IPR008271 GO:0004672|GO:0006468
Arst10g00046 1017 Pfam Leucine rich repeat 157 216 IPR001611 GO:0005515
Arst10g00046 1017 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 12 971 - -
Arst10g00046 1017 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 12 971 - -
Arst10g00046 1017 ProSiteProfiles Protein kinase domain profile. 669 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00046 1017 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 33 196 - -
Arst10g00046 1017 MobiDBLite consensus disorder prediction 976 995 - -
Arst10g00046 1017 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 197 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00046 Arst-Chr10 746552 753238 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00046 4 835 Receptor kinase-like Gene Family AT1G29750 58.463 0.0 1015
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst10g00046 PK_Tyr_Ser-Thr 7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00046 - - qsa:O6P43_032037 1444.87