Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00045 ATGCAACTTCTCAACTTCTTTGGCTTTTTACTTGTTACACTTTGTTGCTTCCAGTTGCTGAGAATATCCGAATCAAAATTGCCAAAAGAAGAAGTTGAAGCTCTCAAAGAAATTACCAGTACAATGGGGGCGGTCTATTGGGAGTTTGATAATGATTCCTGTGACATTATAAGGGTTGGACTAACGCGAGAACCTCCTGACGAATCGGAGAGAAGCATTGTTTGTGACTGCAGTTTTGAAAATAGTACTGTCTGTCATGTTACTAAGATAACCCTCAAGCGCCTTAGTCTACCTGGAGCACTCCCACCTCAACTGGTCAAGCTACCTTTTCTTCAAGATATAGATTTTGCATACAATTGTTTAAATGGCACAATTCCAAAGGAATGGGCTTCAATGAATTTAACTTCCATCTCTCTTCTTGTGAATCGCTTGTCAGGGGAAATTCCAAAGCATCTAGGAAATATTACTACTCTCACATACCTGATGCTGGAAGCAAACAATTTTTCTGGAGTTGTTCCACCTGAACTTGGGAAGCTGATCAACTTGCAGACCTTGGTACTGTCATCAAATCAGTTGACCGGGAACTTACCATCGGCACTTGCTGGGCTGCAAAATTTAACCGACTTTAGGATAAGTAGTAACAACTTTACAGGAACCATACCTGATTTCATAAAGAACTGGCAATTTCTCCAAAGACTAGAAATGCATGGAAGTGGACTAGAAGGACCGATTCCATCAAGTATATCTCTATTGAAGAACTTACTTCAGTTAAGAATCAGTGATATAAAAAGTCCTAGCCAGGTTTTTCCTTCACTGCAGAGCATGACAGCACTAACTACATTGGTCTTAAGGAACTGTAACCTGTCTGGGGAGATACCTTCATACATATGGACCTTGACAAATCTAGCAACTTTGGATGTCAGTTTTAACAAGCTAGTTGGGAAAATTCTCGAAGTCATTAATGTAAAGCGTATGAGATACATCTACCTAACAGGTAACATGCTCAGTGGAAATGTACCAAAGTCAATACTGAAGGATGGAAGTAGCATTGATCTCTCTTACAACAACTTTACTTGGCAAGGGCCTGAGCAACCTGCTTGTCAGGAAGACATTAGGAACTTAAATGTGAATTTGTTCAGAAGCTCAATGATGAAGAATAAGTTAGAGGAATATGTGCCTTGCAAAAGTAACTTCAATTGTCCACGATATTCAAGTTGCTTACATGTCAATTGTGGTGGAAAGGATATACAAGTAAAAGATAATACAGGAAACAGCCTCTATTTCGGAGATGGAGAAGTTGCAGGTGGTACTGCAACATATTTCTATAGCTCCAGTGATCAATGGGGATTTAGTAGCACTGGGGACTTTCTGGATGATTTCGAAGCTCAGAACATACGTTACACTGTATCTCTATCATCTTCAAATATGTCTGAATTGTACACAACAGCACGCATATCTCCAATTTCACTCACTTACTTCCATAATTGCATGGAAAATGGGAACTATACTGTAAATCTTCACTTTGCTGAAATACAGTTTTCAAATGATAACACATATAAAAGCCTTGGGAAGCGTATATTTGATATCTATGTTCAGGAAAAATTGATTAGAAACGATTTTGATATAGAAAATGAGACACATGCTGCTGTAAAACCACTGGTAGTGCCTATATACAATGTCAGCATCACAAATAATGTTTTGGAGATTAGATTCTACTGGGCCGGGAAAGGAACAACTCGAATACCTGATTATGGAGTTTATGGTCCCCTTGTATCAGCATTGTCTGTTGTTTCTGACTCTAGAACTTGCTCAAACGATGGAAAGAAGGTTCCTGTTTCTTTAATAATTGCAAGTGTAGCTGGGGCTCTATGCTTCATTCTTCTTTTGTTTGGATTCATTTGGTGGAAAGGCTTCTTCAGAAGAAAATTGCGACGGAAAGGTACAAAAGGTGGAGATATTCAGTCAGGAACTTTTAGCTTAGAGCAGCTGAGAGCAGCCACTGATGACTTTTCTTCTGTTAACAAGATTGGAGAAGGCGGTTTCGGTCCTGTATACAAGGGTCAACTGCCTGATGGTACTGTTATAGCAGTTAAGCAACTATCATCAAAGTCAAGGCAAGGAAATCGCGAATTCTTAAATGAAATAGGCTTGATATCTTGTTTGCAACATCCCAACCTTGTAAAGCTTTATGGATACTGCACAGAAGGGGAACAACTTCTATTAGTATATGAGTACCTGGAAAATAATAGTCTTTCCCGTGCTTTATTTGGTAGTGAAACCAATCATCTTAAGATAGACTGGCCAACAAGGTTTAGGATCTGCATTGGCATAGCAAAGGGTCTGGCATTTCTCCATGAAGAATCAAGATTCAAGATAGTTCACAGAGATATCAAGGCTTCTAATGTGTTACTTGATGGTGAACTAAATCCTAAGATATCTGACTTTGGATTGGCTAAGCTTCATGAAGATGAGAAGACACATATAAGTACCCGAGTTGCCGGCACTATTGGATATATGGCACCAGAATATGCACTATGGGGCTATCTTACATACAAAGCTGATGTTTACAGCTTTGGGGTTGTGGCCTTAGAAATTGTTAGCGGAAAAAGCAACAACAATTATTTACCAGATGATGAAAGCGTTTGCCTTTTGGATTGGGCTTGCCAATTGCACAAAAAACAGAACTTGGTTAAACTGATTGATGAAAGCTTGGGGCCAGAGGACATTATAACAGAAGCAGAAATGGTGGTAAAAGTATCACTACTATGCACAAATGCATCACCATCACTCAGACCTACAATGTCTGAGGTTGTGAATATGCTTGAAGGTCGTGCAGCTATTCCGTATATGGTTCCAGATCCAAGTTCCTGCAATGAGGATTTGAGGTTTAAAGCTTTAAGAGACTTCCATCAACATAAATCAAAACTGGGTTTGAGTGTAAACCAGACCCCAAATTCAGCAACACCACATACATTCAGCTCAATATCTGGTGATAATAATTACACAAGTTCTATTGAGGAATTAGCTCATTCTGAGATTTCCCCTTTATCAAGTTAA 3057 0.3916 MQLLNFFGFLLVTLCCFQLLRISESKLPKEEVEALKEITSTMGAVYWEFDNDSCDIIRVGLTREPPDESERSIVCDCSFENSTVCHVTKITLKRLSLPGALPPQLVKLPFLQDIDFAYNCLNGTIPKEWASMNLTSISLLVNRLSGEIPKHLGNITTLTYLMLEANNFSGVVPPELGKLINLQTLVLSSNQLTGNLPSALAGLQNLTDFRISSNNFTGTIPDFIKNWQFLQRLEMHGSGLEGPIPSSISLLKNLLQLRISDIKSPSQVFPSLQSMTALTTLVLRNCNLSGEIPSYIWTLTNLATLDVSFNKLVGKILEVINVKRMRYIYLTGNMLSGNVPKSILKDGSSIDLSYNNFTWQGPEQPACQEDIRNLNVNLFRSSMMKNKLEEYVPCKSNFNCPRYSSCLHVNCGGKDIQVKDNTGNSLYFGDGEVAGGTATYFYSSSDQWGFSSTGDFLDDFEAQNIRYTVSLSSSNMSELYTTARISPISLTYFHNCMENGNYTVNLHFAEIQFSNDNTYKSLGKRIFDIYVQEKLIRNDFDIENETHAAVKPLVVPIYNVSITNNVLEIRFYWAGKGTTRIPDYGVYGPLVSALSVVSDSRTCSNDGKKVPVSLIIASVAGALCFILLLFGFIWWKGFFRRKLRRKGTKGGDIQSGTFSLEQLRAATDDFSSVNKIGEGGFGPVYKGQLPDGTVIAVKQLSSKSRQGNREFLNEIGLISCLQHPNLVKLYGYCTEGEQLLLVYEYLENNSLSRALFGSETNHLKIDWPTRFRICIGIAKGLAFLHEESRFKIVHRDIKASNVLLDGELNPKISDFGLAKLHEDEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKSNNNYLPDDESVCLLDWACQLHKKQNLVKLIDESLGPEDIITEAEMVVKVSLLCTNASPSLRPTMSEVVNMLEGRAAIPYMVPDPSSCNEDLRFKALRDFHQHKSKLGLSVNQTPNSATPHTFSSISGDNNYTSSIEELAHSEISPLSS 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00045 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 792 804 IPR008271 GO:0004672|GO:0006468
Arst10g00045 1018 CDD STKc_IRAK 676 943 - -
Arst10g00045 1018 SMART serkin_6 670 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00045 1018 Gene3D Transferase(Phosphotransferase) domain 1 746 948 - -
Arst10g00045 1018 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 265 387 - -
Arst10g00045 1018 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 640 745 - -
Arst10g00045 1018 MobiDBLite consensus disorder prediction 977 996 - -
Arst10g00045 1018 Gene3D Phosphorylase Kinase; domain 1 641 745 - -
Arst10g00045 1018 Pfam Malectin domain 406 594 IPR021720 -
Arst10g00045 1018 Gene3D Ribonuclease Inhibitor 50 200 IPR032675 -
Arst10g00045 1018 Gene3D - 404 601 - -
Arst10g00045 1018 SUPERFAMILY Protein kinase-like (PK-like) 655 942 IPR011009 -
Arst10g00045 1018 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 12 972 - -
Arst10g00045 1018 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 12 972 - -
Arst10g00045 1018 ProSiteProfiles Protein kinase domain profile. 670 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g00045 1018 Pfam Protein tyrosine and serine/threonine kinase 673 941 IPR001245 GO:0004672|GO:0006468
Arst10g00045 1018 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 33 196 - -
Arst10g00045 1018 SUPERFAMILY L domain-like 81 341 - -
Arst10g00045 1018 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 404 599 - -
Arst10g00045 1018 FunFam Putative LRR receptor-like serine/threonine-protein kinase 746 952 - -
Arst10g00045 1018 Pfam Leucine rich repeat 157 216 IPR001611 GO:0005515
Arst10g00045 1018 Gene3D Ribonuclease Inhibitor 201 398 IPR032675 -
Arst10g00045 1018 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 197 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00045 Arst-Chr10 746552 753238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00045 4 836 Receptor kinase-like Gene Family AT1G29750 58.273 0.0 1009
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst10g00045 PK_Tyr_Ser-Thr 7.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00045 - - qsa:O6P43_032037 1440.25