Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00038 ATGTCAGATAATAATAACAATAATAACAGAGATGTTGTAATGAGTGTTACCAATGATGAAGATGAGTCAGACACCAAGGTCACTGTGCCTCTTCTGCAAAAGATGGTAGCAGAGGCAGTGGGAACGTTCTTCTTGATATTTGCAGGGTGTGGTTCATTGGTTATGAACCTCAACAACGACAAGGTGGTGACACTTGCAGGAATCGCAACAGTTTGGGGGCTGCTTGTGATGGTGTTAATATACTCTCTTGGACACATATCTGGTGCTCATTTCAACCCTGCAGTTACCATTGCTCTTGCTTCCATAAACAGGTTCCCTTGGAACCAGGTTCCTGCTTATATCTTCTCTCAAGTCCTTGGATCCACACTTGCAAGTGGTGCTCTCAGACTCTTATTTACGGGCAAGGATAACCAGTTTCCCGGAACCGTTCCATCTGTGACTCACGTTCAAGCTCTCGTTATTGAATTCATAATCACTTTCTTTCTCATGTTCGTCATTTCTGGGGTGGCCACTGATAACCGAGCGATTGGTGAATTGGCTGGACTTGCAGTTGGATCTACTATTCTACTAAATGTGCTCGTTGCAGGGCCATTAACGGGAGCATCAATGAACCCTGCAAGATCATTGGGACCAGCTATTGTGCACAGTGAATACAGAGGAATATGGGTGTATTTGGTGTCACCCATTGTTGGAGCTGTGGCTGGTGCATGGACCTACAATTTCGTTAGGTACACAAAGAAGCCGGTTCGTGAGATCATCAAGAGTGCCTCTTTCTTCAAGGGGAGTAAATAG 792 0.4495 MSDNNNNNNRDVVMSVTNDEDESDTKVTVPLLQKMVAEAVGTFFLIFAGCGSLVMNLNNDKVVTLAGIATVWGLLVMVLIYSLGHISGAHFNPAVTIALASINRFPWNQVPAYIFSQVLGSTLASGALRLLFTGKDNQFPGTVPSVTHVQALVIEFIITFFLMFVISGVATDNRAIGELAGLAVGSTILLNVLVAGPLTGASMNPARSLGPAIVHSEYRGIWVYLVSPIVGAVAGAWTYNFVRYTKKPVREIIKSASFFKGSK 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00038 263 PANTHER AQUAPORIN NIP2-1 15 258 IPR034294 -
Arst10g00038 263 MobiDBLite consensus disorder prediction 1 21 - -
Arst10g00038 263 CDD MIP 33 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst10g00038 263 PRINTS Major intrinsic protein family signature 222 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst10g00038 263 PRINTS Major intrinsic protein family signature 33 52 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst10g00038 263 PRINTS Major intrinsic protein family signature 109 128 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst10g00038 263 PRINTS Major intrinsic protein family signature 154 172 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst10g00038 263 PRINTS Major intrinsic protein family signature 185 207 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst10g00038 263 PRINTS Major intrinsic protein family signature 72 96 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst10g00038 263 Gene3D Glycerol uptake facilitator protein. 1 252 IPR023271 -
Arst10g00038 263 SUPERFAMILY Aquaporin-like 29 252 IPR023271 -
Arst10g00038 263 Pfam Major intrinsic protein 28 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst10g00038 263 ProSitePatterns MIP family signature. 90 98 IPR022357 -
Arst10g00038 263 NCBIfam MIP family channel protein 37 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00038 Arst-Chr10 711259 712790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00038 29 260 Major Intrinsic Protein MIP AT5G37820 62.069 2.00e-101 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00038 K09874 - gmx:100812577 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00038 10 711259 712790 Arst10g00038 10 711259 712790 ECH
Arst3g06184 3 134883256 134887494 Arst10g00038 10 711259 712790 PCT