Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3233 ATGAATAATTTTTCTCACGTTCCCCCCGGTTTTCGGTTCCATCCCACAGATGAGGAACTTGTTGATTACTACCTGAGGAAGAAAGTTACTTCAAGGAGGATTGACCTCGATGTCATAAAAGATGTTGACCTCTATAAAATTGAGCCATGGGATCTTCAAGAGCTTTGCAGAATAGGAACAGAAGAGCAAAATGAATGGTACTTCTTTAGCCATAAAGATAAGAAGTATCCAACTGGAACTCGCACAAATAGAGCAACAGCAGCAGGATTTTGGAAAGCAACTGGAAGAGACAAAGCAATCTATTCTAAGCATGACTTGATAGGGATGAGGAAAACCTTAGTCTTTTATAAAGGTCGAGCCCCTAATGGACAAAAATCTGATTGGATCATGCACGAGTATCGCCTCGAAACAGATGAAAATGGCACACCACAGGAAGAAGGATGGGTTGTCTGTAGAGTATTCAAAAAGAGACTAGCAACCATGCGTAAACTGAGTGAGCATGATTCTCCCTGTTGGTATGATGACCAAGTCTCTTTCATGCAAGACTTGGACTCACCAAAGCAAAGCTCTCAACCTAATTTTTCCTACCAGTTCCCTTACCCTTGCAAGAAAGAGCTAGATTTGCCATACCATTTACCTCTCCAACTTCCAATAGAGAACCCAAAACTGCTTCAATCTGCCTCCAACACTATGACACCATTTGGTATAGAAGAAAATCACGCCACTCCAGCATCAATCATGCAACAAGTTCAACAAACTAGTCAGCAAAATTTTCAGGCAGTGTTTGGACACAATACCAATGAACAAGTGGCTGATTGGCGAGCTCTTGACAAGTTTGTTGCATCACAACTCAGCCAAGAAGATGCATCCAAAGACAATACTTACACAAGCAACAATATATTTCAGGTGAAGAACAATAGCAATATTGAACAGTTGAGGGAGTTGGACAAACAAGACTTGATGCCTGAAAACGCCTCAACATCAAATTCAAGCTGTCCAATTGACATGTGGAAATAG 1017 0.411 MNNFSHVPPGFRFHPTDEELVDYYLRKKVTSRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRLATMRKLSEHDSPCWYDDQVSFMQDLDSPKQSSQPNFSYQFPYPCKKELDLPYHLPLQLPIENPKLLQSASNTMTPFGIEENHATPASIMQQVQQTSQQNFQAVFGHNTNEQVADWRALDKFVASQLSQEDASKDNTYTSNNIFQVKNNSNIEQLRELDKQDLMPENASTSNSSCPIDMWK* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3233 338 MobiDBLite consensus disorder prediction 321 338 - -
Apr9g3233 338 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 329 - -
Apr9g3233 338 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 329 - -
Apr9g3233 338 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Apr9g3233 338 MobiDBLite consensus disorder prediction 317 338 - -
Apr9g3233 338 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Apr9g3233 338 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Apr9g3233 338 Gene3D NAC domain 16 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3233 Apr-Chr9 39705718 39709798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3233 1 338 NAC Transcription Factor Family AT1G12260 58.523 4.76e-137 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr9g3233 NAM 3.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3233 - - gmx:100775867 594.349