Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3232 ATGGCCAAAAGTCTTGGCCTAATCATAGTCTTCATATCCTTATTTTCTCTGCCTTCACCAACCCTTTCAAGCATGTTATCTAATGCCATTGATTTTTGGTGCGATAAAACCCCACATCCTCAAACATGCTTGCATTTTGCCACAATAAACCATCACCTTCAAGATGGTATCCCAAAAAGTGCATCACAATTCAAGAACTTCATCCTTAGAATTGCAATGGACCAATCAGTGAAAGCCCAAATTCGCATTGTGTGGTTGGGCTCCAAATGTAGAAGCAAGGAAGAAAAAGCAGCATGGAGAGATTGCATAAACCTATATCAAGACACCATCACCATTCTCAACCAAACACTTGACCCTATCAAACAAAGTACTAGCTATGATCTCCAAACATGGCTTAGCACAGCTTTAACCAACCTTGACACTTGCCAAACCGGGTTCCAAGAGTTTGGGGTTGGCAACAATGTTCTACCCCTCATTCCCAACAAGACTATCTCAAAGATCATAAGCAACTTTTTAGCTCTTAACAATGCTTCTTCATCAATTACTCCAAAGACTATGAGTTCCCAAAATGGGTTTCCAAGTTGGCTGTCACCCGGTGATAGGAAGCTTCTAGAGTCACCATTGTTATCACCAAATGTTGTGGTGGCCAAAGATGGTTCAGGGAATTTTAAGACCATCAAGGAAGCTTTGGAAGCTGTTCCCAAGAGGAGTGGGAAAAATAGGTTTGTTATATATGTTAAGCCTGGGGTTTATAATGAAAACATTGAAATTGGAAGGAACTTAAATAATATTATGTTGTATGGTGATGGTATAAGGCTCACCATCATCTCTGGTAGCCGAAGCATTGGAGGAGGTTCTACCACTTTTAATTCGGCAACAGTTGCAGTGGTAGGAGATGGATTCATTGGTCGTGGCATAACATTTCGGAACACAGCAGGGCCACAAAAACACCAAGCAGTAGCATTGCGTTGTGGTGCTGATCACTCTGTCTTTTATCGTTGTGCTTTTGAAGGCTATCAAGACACTCTCTATGTCCACTCCCAAAGACAATTCTTCAAGGAATGCCACATTTATGGCACACTCGACTTCATCTTTGGCAATGCCGCTGTAGTCTTCCAGAGCTGCAACATTTATGCAAGAAGGCCAATGCAGAAACAGAAAATTGCCATAACAGCACAAGGTAGGTCAGATCCAAATCAAAACACTGGGATTTCCATCCAAAACTCGCGTGTTATGGCCGCTGAAGATCTTGTCCCTATGTTGGGCTCCTTCAAAACCTTCTTGGGTAGGCCATGGAAGGAGTATTCAAGAACCGTGTTCTTGCAAACATACCTCGATGCATTAGTGGACCCTGCTGGGTGGTTGGAGTGGAATGGTGATTTTGCCTGTGACACATTGTATTATGGAGAGTATAAGAACCTTGGTCCTAGGGCTTCCACTGGAGGAAGAGTTAAATGGCATGGTTACCATGTCATAACAAGTGCAACCCAAGCATCCAAATTCACGGTTGAAAATTTCATTGCAGGGAGATCATGGTTACCTGCCACAGGCATTCCATTCTTCTCGGGACTCTGA 1575 0.4292 MAKSLGLIIVFISLFSLPSPTLSSMLSNAIDFWCDKTPHPQTCLHFATINHHLQDGIPKSASQFKNFILRIAMDQSVKAQIRIVWLGSKCRSKEEKAAWRDCINLYQDTITILNQTLDPIKQSTSYDLQTWLSTALTNLDTCQTGFQEFGVGNNVLPLIPNKTISKIISNFLALNNASSSITPKTMSSQNGFPSWLSPGDRKLLESPLLSPNVVVAKDGSGNFKTIKEALEAVPKRSGKNRFVIYVKPGVYNENIEIGRNLNNIMLYGDGIRLTIISGSRSIGGGSTTFNSATVAVVGDGFIGRGITFRNTAGPQKHQAVALRCGADHSVFYRCAFEGYQDTLYVHSQRQFFKECHIYGTLDFIFGNAAVVFQSCNIYARRPMQKQKIAITAQGRSDPNQNTGISIQNSRVMAAEDLVPMLGSFKTFLGRPWKEYSRTVFLQTYLDALVDPAGWLEWNGDFACDTLYYGEYKNLGPRASTGGRVKWHGYHVITSATQASKFTVENFIAGRSWLPATGIPFFSGL* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3232 524 CDD PMEI-like_3 33 177 - -
Apr9g3232 524 SUPERFAMILY Pectin lyase-like 209 523 IPR011050 -
Apr9g3232 524 PANTHER PECTINESTERASE 8 523 - -
Apr9g3232 524 Gene3D - 208 524 IPR012334 -
Apr9g3232 524 ProSitePatterns Pectinesterase signature 1. 238 257 IPR018040 -
Apr9g3232 524 PANTHER PECTINESTERASE 8 523 - -
Apr9g3232 524 ProSitePatterns Pectinesterase signature 2. 357 366 IPR033131 -
Apr9g3232 524 Pfam Plant invertase/pectin methylesterase inhibitor 29 174 IPR006501 GO:0004857
Apr9g3232 524 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 177 IPR035513 -
Apr9g3232 524 Pfam Pectinesterase 212 509 IPR000070 GO:0030599|GO:0042545
Apr9g3232 524 SMART PMEI_2 25 174 IPR006501 GO:0004857
Apr9g3232 524 TIGRFAM PME_inhib: pectinesterase inhibitor domain 1 176 IPR006501 GO:0004857
Apr9g3232 524 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 177 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3232 Apr-Chr9 39696186 39699878 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3232 8 524 Carbohydrate Esterase AT2G45220 58.221 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3232 K01051 - gmx:100776412 858.211