Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3230 ATGGAAGCCAACCCTTTGAAGCTAGCTTCCCACAAGCTTCTCACAAATGTTATCTTCATTCTTCTAGCCATATCAGGCATCACTTCAGCATGCAACAATTCTAGTTCCACCCAAACCTACAGAAACTACATTAAGGCCTCTTGCAATTCAACCACATATCCATCAATATGCTACCGCACTTTATCTCCCTATGCTTTAAAAATTGAAGCAAATCCTCTGAAGCTGTGCAATGTGTGTCTCTCCCTTGCCTTAAAGGCAGCTCATAGTGCATCCTCCACCATATCAAAGATTCTGAAGAGCAATAATTTGACAAGCATTGAAGAACAAGTTGTACAAGATTGCTTTGGTGATGTAAAGGACTCTATTGGAGAATTGAAGGACTCTCTTGATACCATGGGACATTTGACTGGCACTGATAGAAATTTTCAGATTAGTAACATAAAGACTTGGGTGAGTGCTTCTATCACCAATGAAGAAACGTGCTCAGATGAGTTTGATGAGATGAATGTGAATGCCACCTTGAGGGACAAAATCAGGAACATTGTTTTGGATGTGGCAAGGAAGACTAGCAATGCTTTGTATTTCATCAACCATTACACATACTAA 606 0.3993 MEANPLKLASHKLLTNVIFILLAISGITSACNNSSSTQTYRNYIKASCNSTTYPSICYRTLSPYALKIEANPLKLCNVCLSLALKAAHSASSTISKILKSNNLTSIEEQVVQDCFGDVKDSIGELKDSLDTMGHLTGTDRNFQISNIKTWVSASITNEETCSDEFDEMNVNATLRDKIRNIVLDVARKTSNALYFINHYTY* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3230 201 TIGRFAM PME_inhib: pectinesterase inhibitor domain 17 200 IPR006501 GO:0004857
Apr9g3230 201 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Apr9g3230 201 CDD PMEI-like_3 46 200 - -
Apr9g3230 201 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 199 - -
Apr9g3230 201 SMART PMEI_2 39 195 IPR006501 GO:0004857
Apr9g3230 201 Pfam Plant invertase/pectin methylesterase inhibitor 43 193 IPR006501 GO:0004857
Apr9g3230 201 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 199 IPR035513 -
Apr9g3230 201 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 199 IPR035513 -
Apr9g3230 201 PANTHER PECTINESTERASE INHIBITOR 4 9 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3230 Apr-Chr9 39674814 39675419 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3230 44 200 Carbohydrate Esterase AT3G14310 27.329 8.06e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3230 - - gmx:100527443 295.434