Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3229 ATGGGAAGGGTTTCCCCTCTTTTCTTGCTTCTCTCTGTACTCTATATTGCAGGCATAGCCAAGTTGACAATTGCAAGTCCCAGCAATTTCATAAAGTCCTCTTGCAGCACCACTCAATACCCAGCTTTGTGTGTTGAGTCTCTCTCAGTCTATGCCACCACCATCCAACAAGACCCTCACCAATTAGTCCAAACAGCCTTGTCAGTGAGCCTCAACAGGACTGAGTCCACCAAGGCCTTTGTCACAAAGTGCAACAAATTTAGGGGCCTAAAACCAAGAGAATATGCTGCCTTACATGATTGTGCTGAAGAAATTAGTGATAGTGTGGACAGGCTAAGCCGTTCACTCAAGGAGCTGAAACTGTGCAATGTCAAAGGTGAGGATTTCAATTGGCACATAAGCAATGTTGAGACATGGGTCAGTTCTGCCTTGACTGATGAAAGCACTTGCAGTGATGGGTTTGCTGGAAATGCCCTTAATGGGAAAATCAAGGCTTCAATTAGAGCTAAAATGGTGAATGTTGCTCAGGTCACTAGTAATGCTCTTGCACTCATTAATCAATATGCTGCAAAACACTAG 579 0.4421 MGRVSPLFLLLSVLYIAGIAKLTIASPSNFIKSSCSTTQYPALCVESLSVYATTIQQDPHQLVQTALSVSLNRTESTKAFVTKCNKFRGLKPREYAALHDCAEEISDSVDRLSRSLKELKLCNVKGEDFNWHISNVETWVSSALTDESTCSDGFAGNALNGKIKASIRAKMVNVAQVTSNALALINQYAAKH* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3229 192 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 188 IPR035513 -
Apr9g3229 192 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 192 - -
Apr9g3229 192 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 8 192 - -
Apr9g3229 192 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 188 IPR006501 GO:0004857
Apr9g3229 192 CDD PMEI-like_3 33 190 - -
Apr9g3229 192 Pfam Plant invertase/pectin methylesterase inhibitor 29 184 IPR006501 GO:0004857
Apr9g3229 192 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 188 IPR035513 -
Apr9g3229 192 SMART PMEI_2 26 184 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3229 Apr-Chr9 39664122 39665283 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3229 26 185 Carbohydrate Esterase AT3G14310 31.288 5.52e-23 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3229 - - gmx:100305900 311.997