Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3214 ATGGCTTCGTCGTCGAGTAGCGGATTGACGTTCAAGCTGCACCCTCTGGTAATCGTGAACATCTCGGACCATTACACGAGGGTGAAGTCTCAGATGAACCCAACTCTCGCACCGCACAACACCGCCCCCAATGGCGGCGACGGCGTCGTTTCTTCCCTTCCTCCGAGGGTTTATGGCTGTGTCATAGGGGTGCAGAAGGGTCGCACCGTCGAGATCTTCAACAGCTTCGAACTCCTCTATGATCCTTCTACCCATTCCCTCGATCGTTCCTTCCTCGAGAAGAAGCAAGAGCTCTATAAGAAGGTTTTCCCACATTTCTACATACTGGGATGGTATTCAACTGGAAGTGATGCGCAGGAATCAGATATGCATATTCACAAAGCTTTGATGGATATCAACGAAAGTCCAGTTTATGTTCTTCTCAATCCTTCTATCAATCATTCTCAAAAGGATCTCCCAGTCAGTATTTATGAAAGTGAACTGCATGTCATAGATGGAATTCCACAGCTTATCTTTGTTCGCTCTAGCTATACTATTGAGACTGTTGAAGCAGAACGGATATCAGTTGATCATGTTGCTCATCTTAAGCCATCTGATGGTGGTTCAGCTGCTACACAATTGGCTGCTCACCTTACTGGTATACACAGTGCCATCAAAATGCTTCATAGCAGAATAAAAGTGCTTCATCACTATCTTCTTGCAATGCAAAAAGCAGGTGATGTTCCTTGTGAAAATTCACTATTAAGACAAGTATCAAGTCTCCTGAGAAGACTGCCTGCTATTGAATCTGGGAAATTTCAAGATGATTTCTTAATGGAGTACAATGACACCTTATTGATTAGTTACCTTGCCATGCTGACCAACTGCTCAAGTGCAATGAATGAACTGGTGGACAAATTTAATACCGCGTATGATAGGCATAGCAGAAGGGGTGGACGAACCGCTTTTATGTAA 954 0.4423 MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPTLAPHNTAPNGGDGVVSSLPPRVYGCVIGVQKGRTVEIFNSFELLYDPSTHSLDRSFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKALMDINESPVYVLLNPSINHSQKDLPVSIYESELHVIDGIPQLIFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLHSRIKVLHHYLLAMQKAGDVPCENSLLRQVSSLLRRLPAIESGKFQDDFLMEYNDTLLISYLAMLTNCSSAMNELVDKFNTAYDRHSRRGGRTAFM* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3214 317 CDD MPN_CSN6 9 313 IPR033859 GO:0000338|GO:0008180
Apr9g3214 317 Gene3D Cytidine Deaminase, domain 2 1 197 - -
Apr9g3214 317 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 2 317 - -
Apr9g3214 317 Pfam Maintenance of mitochondrial structure and function 183 298 IPR024969 -
Apr9g3214 317 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 7 135 IPR000555 GO:0005515|GO:0008233|GO:0008237
Apr9g3214 317 ProSiteProfiles MPN domain profile. 11 163 IPR037518 -
Apr9g3214 317 SMART pad1_6 10 162 IPR000555 GO:0005515|GO:0008233|GO:0008237
Apr9g3214 317 PANTHER COP9 SIGNALOSOME COMPLEX SUBUNIT 6A 2 317 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3214 2 268 Eukaryotic Initiation Factors Gene Family AT2G39990 22.059 2.20e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3214 K12179 - gmx:100797079 594.734