Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3213 ATGAAAAGAGAGAAACCAAACCTTAAGCAGAAGATGTCATGGTCACCACCAAGAGAAGGAGGAAGAGCACCAACACTAGTAGTGGGGTTCGTTGCGATTCCCTTATTGGTGATTGCAACAGTTACCACAATAGCAGCAGCAACAACAAAAGCTTCTGAAGACGACGCAGTGCTGTTATTACGGTTCAAGCAGTTACATGTTTCCTCCGATCCCCACAACTTCCTCTCCGACTGGGTTCCACATGCACAGTCCCCGTGCACCTGGCGCGGTGTCTCCTGCTCGGCTGAGGACCGCCGAGTCAACGCTCTCGACCTCCGAGGCGCGTCCCTCTCCGGCACCCTCCACCTTCCCACTCTCACTTCCCTTCCTTCTCTGCAACTCCTCTTCTTACATGGCAACTCCTTCACCTCTTTCAACCTCTCAGTTTCACCCTCTTGCGCGCTCCAAACACTAGACCTTTCCTTTAACAACTTCTCTGGCATGTTCCCCTTCGCTAACCTCACCCCTTGTAACAACCTCGGCCACCTCAACCTTTCTCACAACCTCATCACCGGTGGGCTTGGGTCTGGGCCTGGTCTCGGACTGGTCCAGCTCGACCTATCCCGCAACCGTGTTTCAGACGTAAACCTTCTCCAAACCGCTCTTGGAAACTCTCGTTTGGTTCTGCTTAACTTCTCTGACAACAAACTCGCGGGTCAACTCAGGGAAACACTCACTCCGAGTAGCGCGAACCTTTCGACGTTGGATTTGTCTTGTAACCTTCTATCGGGGAAGATACCGCCTCGGCTTGTAAACGACGCGGTTGAGGTCTTGGATCTCTCGTCAAACAATTTTTCCGGCGGCTTCTCCGGGATGGATTTCGGTGGGTGCCGGAGCCTCGTTCGGTTGAGTTTCTCTAACAATGTGCTCTCCGAAAACGAGTTTCCGAGCGGGTTGAGGAACTGCAACGTTCTGGAGATTCTAGATCTTTCTCGCAATGAGTTCAAGATGGAGATTCCCGGGAATCTTCTCGGTGGTTTAAGGAGTTTGAAGTCTCTGTTTCTAGCGCATAATCGATTTTCCGGAAAAATACCTAAAGAACTCGGAAACGCTTGTGAAACTCTGGTGGACATTGATCTTTCGGAGAACAAGCTTTCTGGTGAATTGCCTTTGAGTTTCGAAAAGTGTTTTTCTCTGCAGAGCCTCAACCTGGAGAGGAACTATCTTTCTGGAAGCTTCCTTGATTCGGTTGTGAGTGATCTTGGGAGTCTTAGGTATCTCAATGCAGCGTTCAATAACATAACAGGGAGTGTTCCCCCGTCTCTTGCTAATTGCACGCAGCTTTTGGTTCTTGACCTCAGTTCCAACGGGTTCACCGGCAATGTTCCTTCCGCATTTTGCCCCTCAGCGTTGGAGAAGATGATCCTAGCCGGTAATTACTTCTCTGGGACGGTGCCAGCGGAGCTTGGTGAGTGTAAGAATCTGAGGACTATTGATTTTAGCTTTAACAGTTTGAACGGTTCTATACCGTGGGAAATTTGGGCTTTGCCTAAGCTTTCTGACTTGATCATGTGGGCGAATAACCTCACGGGTGAGATTCCTGAAGGAATATGCGAGAAAGGAGGAAACTTGGAGACATTGATTCTTAACAATAATTTCATTTCGGGGTCCATTCCTCGGTCTATTGCCAATTGCACTAACATGATTTGGGTGTCTTTGGCGAGCAACCGCATTAGTGGGGAGATACCTGCTGGAATTGGGAATCTGAATGCATTGGCTATTCTTCAGCTGGGAAACAATTCGCTGACTGGGAGGATTCCCCGGGAGATTGGCCAGTGTAGGAGGTTGATATGGTTGGATTTGAATAGTAATAACTTGACTGGGACAATCCCATTTGAGCTTGCAAACCAGTCTGGGTTGGTTGTTCCGGGGAGTGTTTCAGGGAAGCAGTTTGCATTTGTGAGGAATGAGGGTGGGACTAGTTGCAGGGGAGCAGGGGGGTTGGTTGAGTTTGAGGATATCAGGACAGAGAGGCTTGAAGGTTTTCCTATGGTGCATTCTTGTCCTTTGACTCGGATTTACTCTGGTTGGACGGTCTATACCTTTAGCTCTAATGGTAGCATGATCTACCTTGACCTGTCCTATAATTTGTTGTCTGGAAGTATTCCTGGAAACTTGGGTGCAATGGCCTATTTACAGGTCTTGAATTTGGGACATAATAGGCTAACTGGAACAATTCCAGATAGTTTTGGTGGTCTAAAAGCTATAGGAGTGCTTGATCTCTCCCATAATGAACTTCAGGGGTTCATCCCTGGGGCGTTGGAAGGTCTATCTTTTCTCAGTGACCTTGATGTGTCTAATAATAACCTTACAGGTTCCATTCCTTCTGGAGGTCAGCTAACCACTTTCCCTGCATCCAGATATGAAAACAACTCTGCCCTTTGTGGGGTCCCGTTGCCGCCTTGTGGCCCTTCAAATCACTCAGCAGCTGTTGGTGCTTGGAAGAAGAAGCAACCTGTTGCTGCAGGGGTTGCCATTGGCCTCCTTGGCTTCCTCTTGTTTGTTCTTGGGGTTTTATTAGCTTTATACCGGGTTAGGAAGGCCCAGAGGAAGGAGGAAAAGAGAGAAAAGTATATCGAAAGTCTTCCAACTTCTGGTAGTAGCAGTTGGAAACTTTCTAGCTTTCCTGAGCCTCTGAGCATCAACGTTGCCACCTTTGAGAAACCTCTGCGTAAGTTGACATTTGCCCATCTTCTTGAGGCTACTAATGGTTTCAGTGCTGAGAGTTTGATAGGGTCTGGAGGGTTTGGTGAAGTCTACAAAGCTAAGCTGAAAGATGGTTGTGTTGTTGCTATCAAGAAGCTCATTCATGTCACGTGTCAGGGAGATAGAGAATTCATGGCTGAAATGGAAACTATTGGGAAGATCAAGCATCGAAACCTGGTTCCATTGCTGGGTTACTGTAAAGTTGGAGAGGAGAGGCTTCTTGTGTATGAGTACATGAAATGGGGGAGCCTGGAGGCTGTTCTGCATGATAGGGCCAAAGGAGGAGGAGGTTCAAAGCTTGATTGGACAGCAAGAAAGAAGATTGCCGTAGGGTCAGCAAGAGGTCTTGCATTTCTTCACCATAGTTGCATACCTCACATTATACACCGGGATATGAAGTCCAGCAATATTCTTCTTGATGAAAACTTTGAAGCCAGAGTTTCAGATTTTGGCATGGCAAGATTGGTTAATGCCCTTGACACTCATCTAACAGTCAGCACACTTGCAGGGACGCCTGGTTATGTACCCCCTGAGTACTACCAAAGTTTTAGATGTACAGCAAAAGGGGATGTCTATAGCTATGGTGTCATACTGCTAGAGCTTCTATCAGGGAAGAGGCCAATTGACTCGTCTGAATTTGGTGATGACAGTAATCTTGTTGGATGGTCTAAGAAGCTTTACAAAGAGAAAAGGATTAGCGAAATACTTGATCCTGACTTAATTATGCAAACATCTAGTGAAAGTGAACTTTATCAATGTTTGAGAATTGCTTTTGAATGTCTAGATGAGAGACCATACCGGCGGCCAACCATGATACAAGTAATGGCAATGTTTAAAGAGCTTCAGGCTGACACAGATAATGATATGCTTGATAGCTTCTCTCTGAGAGACAATGTTATTGATGAAGCATGA 3657 0.4692 MKREKPNLKQKMSWSPPREGGRAPTLVVGFVAIPLLVIATVTTIAAATTKASEDDAVLLLRFKQLHVSSDPHNFLSDWVPHAQSPCTWRGVSCSAEDRRVNALDLRGASLSGTLHLPTLTSLPSLQLLFLHGNSFTSFNLSVSPSCALQTLDLSFNNFSGMFPFANLTPCNNLGHLNLSHNLITGGLGSGPGLGLVQLDLSRNRVSDVNLLQTALGNSRLVLLNFSDNKLAGQLRETLTPSSANLSTLDLSCNLLSGKIPPRLVNDAVEVLDLSSNNFSGGFSGMDFGGCRSLVRLSFSNNVLSENEFPSGLRNCNVLEILDLSRNEFKMEIPGNLLGGLRSLKSLFLAHNRFSGKIPKELGNACETLVDIDLSENKLSGELPLSFEKCFSLQSLNLERNYLSGSFLDSVVSDLGSLRYLNAAFNNITGSVPPSLANCTQLLVLDLSSNGFTGNVPSAFCPSALEKMILAGNYFSGTVPAELGECKNLRTIDFSFNSLNGSIPWEIWALPKLSDLIMWANNLTGEIPEGICEKGGNLETLILNNNFISGSIPRSIANCTNMIWVSLASNRISGEIPAGIGNLNALAILQLGNNSLTGRIPREIGQCRRLIWLDLNSNNLTGTIPFELANQSGLVVPGSVSGKQFAFVRNEGGTSCRGAGGLVEFEDIRTERLEGFPMVHSCPLTRIYSGWTVYTFSSNGSMIYLDLSYNLLSGSIPGNLGAMAYLQVLNLGHNRLTGTIPDSFGGLKAIGVLDLSHNELQGFIPGALEGLSFLSDLDVSNNNLTGSIPSGGQLTTFPASRYENNSALCGVPLPPCGPSNHSAAVGAWKKKQPVAAGVAIGLLGFLLFVLGVLLALYRVRKAQRKEEKREKYIESLPTSGSSSWKLSSFPEPLSINVATFEKPLRKLTFAHLLEATNGFSAESLIGSGGFGEVYKAKLKDGCVVAIKKLIHVTCQGDREFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGSLEAVLHDRAKGGGGSKLDWTARKKIAVGSARGLAFLHHSCIPHIIHRDMKSSNILLDENFEARVSDFGMARLVNALDTHLTVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKRPIDSSEFGDDSNLVGWSKKLYKEKRISEILDPDLIMQTSSESELYQCLRIAFECLDERPYRRPTMIQVMAMFKELQADTDNDMLDSFSLRDNVIDEA* 1219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3213 1218 Gene3D Transferase(Phosphotransferase) domain 1 994 1214 - -
Apr9g3213 1218 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1042 1054 IPR008271 GO:0004672|GO:0006468
Apr9g3213 1218 SUPERFAMILY RNI-like 102 460 - -
Apr9g3213 1218 Pfam Protein kinase domain 920 1191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g3213 1218 ProSiteProfiles Protein kinase domain profile. 918 1196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g3213 1218 Gene3D Ribonuclease Inhibitor 195 816 IPR032675 -
Apr9g3213 1218 Gene3D Ribonuclease Inhibitor 47 187 IPR032675 -
Apr9g3213 1218 MobiDBLite consensus disorder prediction 1 20 - -
Apr9g3213 1218 Pfam Leucine rich repeat N-terminal domain 53 94 IPR013210 -
Apr9g3213 1218 Gene3D - 639 696 - -
Apr9g3213 1218 SUPERFAMILY L domain-like 456 801 - -
Apr9g3213 1218 PANTHER SERINE/THREONINE-PROTEIN KINASE BRI1-LIKE 1 37 1204 - -
Apr9g3213 1218 SMART LRR_typ_2 312 339 IPR003591 -
Apr9g3213 1218 SMART LRR_typ_2 414 438 IPR003591 -
Apr9g3213 1218 SMART LRR_typ_2 509 533 IPR003591 -
Apr9g3213 1218 SMART LRR_typ_2 582 606 IPR003591 -
Apr9g3213 1218 SMART LRR_typ_2 746 769 IPR003591 -
Apr9g3213 1218 SMART LRR_typ_2 340 364 IPR003591 -
Apr9g3213 1218 SMART LRR_typ_2 722 745 IPR003591 -
Apr9g3213 1218 SMART LRR_typ_2 770 793 IPR003591 -
Apr9g3213 1218 SMART LRR_typ_2 122 145 IPR003591 -
Apr9g3213 1218 SMART serkin_6 918 1193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g3213 1218 ProSitePatterns Protein kinases ATP-binding region signature. 924 947 IPR017441 GO:0005524
Apr9g3213 1218 Gene3D Phosphorylase Kinase; domain 1 881 993 - -
Apr9g3213 1218 SUPERFAMILY Protein kinase-like (PK-like) 899 1193 IPR011009 -
Apr9g3213 1218 Pfam Leucine Rich Repeat 536 558 IPR001611 GO:0005515
Apr9g3213 1218 Pfam Leucine rich repeat 725 783 IPR001611 GO:0005515
Apr9g3213 1218 Pfam Brassinosteroid receptor island domain 632 696 IPR045381 -
Apr9g3213 1218 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 37 1204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3213 Apr-Chr9 39157365 39163667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3213 54 1217 Receptor kinase-like Gene Family AT1G55610 64.037 0.0 1461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Apr9g3213 Pkinase 2.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3213 - - gmx:102670093 1886.69