Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3212 ATGGCTGGGATTGATGATAATGTTGCCCTTACTGGGGATTGGGGTCTTCCTAGCCCAAGTCCAAGGACCCTTTTTTCTAGAATGCTAGATGAAGATAATGTAACAAGATCGATCTCAGAACACCCTGGAAGTGGTAGAACTGAGGATCCATTTCTGGGGGCTCACGCACGTAGTGAAGCAGGGAAAGGAGACATGAAAGATGGGACGCATGATGGTGATTCTGGTGCCCAATTGAGCGACATGAATTTTCAGACCGAGCAGAAATCGAGTTCTCGGGGTGGTCTTGTTGAAAGGATGGCTGCTAGAGCCGGGTTTAATGCTCCAAGGTTGAATACCGAAAGCATTAGATCTACTGATCTTTCGCTTAATTCAGACATTCAGTCTCCTTACTTAACCATACCCCCTGGTCTCAGTCCTACTACACTTTTAGATTCTCCGGTGTTCCTTGCAAATTCACTGGCACAGCCATCTCCAACAACTGGAAAATTCCTGTTCATGCCCAATGGCAACATGCGGAACTCAGAGTTATCATCTGATGCTCCAGAAAAATGTAAAGATAACAGCTTTGATGATATCTACGCATCATCCTTTGCTTTCAAGCCTGCAACAGATTCAGGCTCTTCTTTTTATCATGGCCCTGGAAAGAAAATAAATCCAGCTACACTTCATCAACAATCCCTTCCTGGTATTGAGGTTTCAGCTCAGTCAGAAAATTCTTTTCAATCTCAAAGTGTTGATGCTGTCAAAGTTCAAACTGAGAACAAAAGTGGCCTCCATCTTCAGGCTGACTTTGTCGAATCACCACCTCAAAAAGATAATGGAATTAAAATGTTCTCAGCTGAGCAAAGGGCTTTTGACACAGTTGGTGGTAACATTGAACATTCCACACCACTTGAAGAGCAAGCAGATGAAGAAGGAGATCAAAGAGGCAATGGAGACGCAATGGCTGGTGGTATTGGCGGTGCACCATCTGAAGATGGATATAACTGGAGAAAATATGGCCAAAAGCAAGTTAAGGGTAGTGAGTACCCACGGAGTTACTACAAGTGTACACATCCACATTGTCAGGTTAAGAAGAAAGTAGAACGATCTCATGAGGGCCACATAACAGAGATCATTTACAAGGGAGCTCACAGCCATCCTAAACCTCCTCCAAATCGTCGGTCAGGCATAGGTTCAGTTAACCTTCATAGTGACATGCAAGTGGACAATCCTGAATATGTTGAACCACAGAGTGGTGAGGATGGTGACCTGGGCTGGGCCAATGTACAAAAGGGAAACATAGCTGGGGCTGCTAATTGGAAGCATGACAACCTTGAAGCAACATCATCAGCATCTGTTGGTCCTGAATACTACAACCAGTCCACCAATTTGCAGACTCAAAATGGTGCTCACTTTGATTCGGGAGAGGCAGTGGATGGCTCATCTACTTTTTCTAATGAAGAAGATGAAGACGATCAAGGCACTCATGGTAGTGTATCATTAGGATATGATGGGGAAGGTGATGAATCAGAGTCTAAGAGAAGGAAACTGGAATCATATGCAACAGAGTTGAGTGGAGCTACTAGGGCTATTCGTGAGCCTAGAGTTGTTGTACAGACTACTAGCGAAGTAGATATCCTTGATGATGGTTACCGGTGGCGGAAATATGGACAGAAAGTTGTCAAAGGAAATCCCAACCCAAGGAGTTACTACAAGTGCACAAATGCAGGCTGCACAGTAAGGAAGCACGTGGAGAGAGCTTCACATGACCTTAAATCTGTGATCACTACTTATGAGGGAAAACACAACCATGATGTTCCTGCTGCTCGTGCTAGCAGTCACGTCAATGCCAACGCCTCTAATGCCATTTCTGGCCAAGCTTCAGGAGTTCTTCAGACCCATGTTCATAGACCTGAACCATCACAAGTTCACAATGGCATGGGAAGGCTGGAGAGGCCTTCCCTTGGCTCATTCAACCTACCTGGAAGGCAGCAGCTTGGACCTTCCCACGGCTTCTCCTTTGGTATGAACCAACAGATGCTGTCGAATCTGGCAATGTCAGGGTTGGGCCCTGCGCAAGCAAAGCTTCCTGTCTTGCCTGTTCATCCATTCTTGGCGCAACAGCGCCCCGCAAATGATTTAAGTTTCATGTTACCAAAGGGAGAACCAAATGTGGAGCCTATTCCTGAACGTGGCCTTAACCTGCCCAGTGGCTCATCAGTATATCAGGAAATCATGAGCCGCATGCCTCTTGGACCTCATATGTAA 2250 0.4573 MAGIDDNVALTGDWGLPSPSPRTLFSRMLDEDNVTRSISEHPGSGRTEDPFLGAHARSEAGKGDMKDGTHDGDSGAQLSDMNFQTEQKSSSRGGLVERMAARAGFNAPRLNTESIRSTDLSLNSDIQSPYLTIPPGLSPTTLLDSPVFLANSLAQPSPTTGKFLFMPNGNMRNSELSSDAPEKCKDNSFDDIYASSFAFKPATDSGSSFYHGPGKKINPATLHQQSLPGIEVSAQSENSFQSQSVDAVKVQTENKSGLHLQADFVESPPQKDNGIKMFSAEQRAFDTVGGNIEHSTPLEEQADEEGDQRGNGDAMAGGIGGAPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPHCQVKKKVERSHEGHITEIIYKGAHSHPKPPPNRRSGIGSVNLHSDMQVDNPEYVEPQSGEDGDLGWANVQKGNIAGAANWKHDNLEATSSASVGPEYYNQSTNLQTQNGAHFDSGEAVDGSSTFSNEEDEDDQGTHGSVSLGYDGEGDESESKRRKLESYATELSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARASSHVNANASNAISGQASGVLQTHVHRPEPSQVHNGMGRLERPSLGSFNLPGRQQLGPSHGFSFGMNQQMLSNLAMSGLGPAQAKLPVLPVHPFLAQQRPANDLSFMLPKGEPNVEPIPERGLNLPSGSSVYQEIMSRMPLGPHM* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3212 749 MobiDBLite consensus disorder prediction 52 73 - -
Apr9g3212 749 MobiDBLite consensus disorder prediction 1 94 - -
Apr9g3212 749 ProSiteProfiles WRKY domain profile. 536 601 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g3212 749 MobiDBLite consensus disorder prediction 297 328 - -
Apr9g3212 749 Gene3D WRKY domain 528 594 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr9g3212 749 MobiDBLite consensus disorder prediction 460 517 - -
Apr9g3212 749 SMART WRKY_cls 541 600 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g3212 749 SMART WRKY_cls 324 382 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g3212 749 Pfam WRKY DNA -binding domain 542 598 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g3212 749 Pfam WRKY DNA -binding domain 325 381 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g3212 749 PANTHER WRKY TRANSCRIPTION FACTOR 2-RELATED 106 677 - -
Apr9g3212 749 MobiDBLite consensus disorder prediction 376 397 - -
Apr9g3212 749 MobiDBLite consensus disorder prediction 460 476 - -
Apr9g3212 749 SUPERFAMILY WRKY DNA-binding domain 533 601 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr9g3212 749 MobiDBLite consensus disorder prediction 500 514 - -
Apr9g3212 749 SUPERFAMILY WRKY DNA-binding domain 323 383 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr9g3212 749 Gene3D WRKY domain 320 384 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr9g3212 749 MobiDBLite consensus disorder prediction 75 92 - -
Apr9g3212 749 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 106 677 IPR044810 GO:0003700
Apr9g3212 749 ProSiteProfiles WRKY domain profile. 325 383 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3212 Apr-Chr9 39091660 39096366 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3212 1 744 WRKY Transcription Factor Family AT5G56270 50.064 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr9g3212 WRKY 3.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3212 K18835 - gmx:100127395 1300.42