Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3195 ATGGATATCTCTGCCAATACTTGTGAGATAGTGGAATCGAGGGAAGAGATAATTTCGGAGTTCAAAATGGATGAAAAACCTGAGAGTAGTTGTGCCCACAAATCAGGAAACAAGTATTCAATAGAGGATGATATTAACCGTCTTTTCCAGTCTATTGACATTAAAAGTACTTCTAGAGGTCTTAGTACATCACGCTTACAAAAGAGTGCCCTTAAAAGGCCAATAAAAGTAAATTCTTCTCAGGCATCAGGAATTGGCATCTCAGAGCCTGTAAGTTTGAAGCAAGCACTTAGAGGGTTGTGTATCTCACAGGCCTCGGAAATGGCTGCTTTGAAGAGATTATCAAAGCCACCCGGTTCATCTAGAGTATCAGAGGCTGGAACCATAAAAAAGTTGTACACTGCAGTGGTAGATGAGGGAAAAGGGAACTTGGTTGAAATCTCCTTAGTGCCAGAGATATCTACTCCTTCTGATAAATTGCCTGATGTAGCAATGTCAAGTGCAGGAGTTAATCGTATTATTCCTTTGGTTGACACAACAAAAGCAAAAGAAATGGCAACTGGGTTTTCTACCCAAGATCAGATTGTTCCTCAACCACTAGAGGTTGAGAGTGACAAGCCAGTCATGGGGATCAGAAAACCCATAATTGCAAATTTGTCACCAGTTGCCTCTGCAAGTGAGGAAGTGGCTGAGGTCAGAGTGGATCCTGCTTCCTCAAGCAAAGCTTCTATTGGTTCTTCGCTGCCAGATGAGGGGCAGGAAGCAAATTTACATTCTGCATCCTGTCCACCTAGCTCCAGCAATGGTAATGGAGTGGATAAACCCACAAACAGTATCACATGTTTGTCAAGGCCAATATTCAATAACTTGAACTTCCTTAAGAAAAAAGTAAAGCAAGACATAAGTTCTGCCTCAAGCTGCCCTACACCATGTATAAAAAATGATTTGGGTTCTATTACAAGTAATTTGGACAAGGAGACTTGCAATTCTTATTTGAAGCATGAAGTAAAAGAAAATGAGAAACAGTCTCCTACCAGTTCAAATCATAGCATTGAAGTTAACTCAATTAATGTTGGTACGGATTCAAGCAAACCTGGTTTCAGCTTGAATTGCAGCAAGAGAACCAAGTTTCTGGTGACAAAAGTTGATGAGAAATCAAGATCGAAGGAAAAAGGTGAGTTCTCCCAGAGCTCAAAAAGTAGCATTGGGGAGTATAGTAGTAGCACAAGCATCAGTGGGGAAAGCAATTTAAGTGGTTCCAGTCGCTGTGGCCACAGGCCTCACATGTCAAAACACTTGAGATGGGAAGCTGTTCGTGCAGTTCAGCAGCAGCATGGTAATTTAAATTTGAGGCACTTTAAGTTGCTCAGGAGGCTTGGTAGCGGGGACATTGGAACTGTTTATCTAGCAGAACTAATTGGTACAAGCTGCCTTTTTGCTCTTAAAGTGATGGACAATGAGTTTTTGGCAAGCCGGAAGAAAATTTTCAGGGCCCAAACTGAACGAGATATCCTTCAGATGCTGGATCATCCATTTCTTCCTACGCTTTATTCCCATATTGCAACAGATAAGCTCTCTTGCTTGGTTATGGAATACTGTCCAGGTGGAGATCTTCATGTGCTGCGACAGAGGCAACCATATAAAAGTTTTTCAGAACAAGCAACTAGGTTTTATGTTGCTGAGGTTCTTCTTGCCCTGGAGTATTTGCACATGCTGGGAGTTGTATATCGAGATCTAAAGCCAGAAAATATTCTAGTTCGAGAAGATGGCCACATTATGCTGACAGATTTTGACCTGTCACTCAGATGTTCTGTCAATCCAATGTTGGTCAAGTCATCATCACCTGACACAGATGTGACAAAGAAGATGTCCAGTCCTTGTTCACAGGCTAGCTGCATACACCCTTTCTGTCTCCAACCAGATTGGCAAGTTTCCTGCTTTACTCCCATTCTATTATCTGCCGGAGCAAAGTCAAGAAAGATGAAGGCTGACATAGCTGCTCAAGTTGGTCCACTCCCACAGCTTGTAGTGGAGCCCACCAGTGCACGATCTAACTCCTTTGTTGGAACCTATGAATATCTTGCACCAGAGATCGTCAAAGGGGAGGGTCATGGGAGTGCCGTAGATTGGTGGACTTTTGGTATATTATTGTTTGAGCTTTTATATGGTAAGACTCCCTTCAAGGGCCCATCAAATGAAGATACATTAGCCAATGTTGTGTCACAAAGCCTCAAGTTCCCAGGTGCTCCAATAGTCAGTTTTCATGCAAGAGATTTGATCAGAGGATTGTTGATAAAGGATCCTGAAAATCGATTAGGATCTGTAAAAGGTGCTGCTGACATAAAACAGCATCCTTTCTTTGAAGGCCTCAACTGGGCTTTAATACGATGTGCGGCACCACCAGAGCTCCCCAAGTTTCAGGATTTTGGGAGTTGTGCTCCATCTTTGGCTGCACAGAAGGAGAATGCTAATGAGTTAGAGGATACAGAAGATTATGAAGAGTTTGAGCTGTTTTAG 2517 0.4243 MDISANTCEIVESREEIISEFKMDEKPESSCAHKSGNKYSIEDDINRLFQSIDIKSTSRGLSTSRLQKSALKRPIKVNSSQASGIGISEPVSLKQALRGLCISQASEMAALKRLSKPPGSSRVSEAGTIKKLYTAVVDEGKGNLVEISLVPEISTPSDKLPDVAMSSAGVNRIIPLVDTTKAKEMATGFSTQDQIVPQPLEVESDKPVMGIRKPIIANLSPVASASEEVAEVRVDPASSSKASIGSSLPDEGQEANLHSASCPPSSSNGNGVDKPTNSITCLSRPIFNNLNFLKKKVKQDISSASSCPTPCIKNDLGSITSNLDKETCNSYLKHEVKENEKQSPTSSNHSIEVNSINVGTDSSKPGFSLNCSKRTKFLVTKVDEKSRSKEKGEFSQSSKSSIGEYSSSTSISGESNLSGSSRCGHRPHMSKHLRWEAVRAVQQQHGNLNLRHFKLLRRLGSGDIGTVYLAELIGTSCLFALKVMDNEFLASRKKIFRAQTERDILQMLDHPFLPTLYSHIATDKLSCLVMEYCPGGDLHVLRQRQPYKSFSEQATRFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCSVNPMLVKSSSPDTDVTKKMSSPCSQASCIHPFCLQPDWQVSCFTPILLSAGAKSRKMKADIAAQVGPLPQLVVEPTSARSNSFVGTYEYLAPEIVKGEGHGSAVDWWTFGILLFELLYGKTPFKGPSNEDTLANVVSQSLKFPGAPIVSFHARDLIRGLLIKDPENRLGSVKGAADIKQHPFFEGLNWALIRCAAPPELPKFQDFGSCAPSLAAQKENANELEDTEDYEEFELF* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3195 838 PANTHER FLIPPASE KINASE 1-RELATED 1 835 - -
Apr9g3195 838 SMART serkin_6 453 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g3195 838 MobiDBLite consensus disorder prediction 343 359 - -
Apr9g3195 838 ProSiteProfiles Protein kinase domain profile. 453 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g3195 838 MobiDBLite consensus disorder prediction 395 423 - -
Apr9g3195 838 MobiDBLite consensus disorder prediction 239 274 - -
Apr9g3195 838 Gene3D Phosphorylase Kinase; domain 1 451 532 - -
Apr9g3195 838 MobiDBLite consensus disorder prediction 388 425 - -
Apr9g3195 838 CDD STKc_phototropin_like 451 810 - -
Apr9g3195 838 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL1 ISOFORM X1 1 835 - -
Apr9g3195 838 Pfam Protein kinase domain 684 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g3195 838 Pfam Protein kinase domain 454 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g3195 838 MobiDBLite consensus disorder prediction 336 359 - -
Apr9g3195 838 Gene3D Transferase(Phosphotransferase) domain 1 533 602 - -
Apr9g3195 838 MobiDBLite consensus disorder prediction 233 274 - -
Apr9g3195 838 SUPERFAMILY Protein kinase-like (PK-like) 427 805 IPR011009 -
Apr9g3195 838 Gene3D Transferase(Phosphotransferase) domain 1 681 805 - -
Apr9g3195 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 574 586 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3195 Apr-Chr9 38749646 38755023 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3195 378 838 AGC Kinase Gene Family AT3G52890 65.890 0.0 643
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Apr9g3195 Pkinase 2.4e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3195 - - gmx:100789339 1357.04