Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3189 ATGGAATCCCGATTAATTGAGGGAAATGGCGAGATGGAAGTTTCTGGGGATGTTAGTTTGAGTACGTATGAAGTTCAGATACACCAAGAAACATATGAAGTGGATCCAAATGAGGGGTGTAGAGCACTAGAGAGTTCTTCAGGGGGAGAGTTGGGTATCTGTGATGATCATGCTATTCAGGAACCATATGAAGGCATGGAATTTGATTCTGAAGATGCTGCGAAGATATTTTATGATGAATATGCCCGGCGTGTAGGATTTGTCATGCGTGTTATGTCTTGTCGACGCTCAGAAAAAGATGGTAGGATTCTTGCCCGCAGGCTTGGATGTAATAAGGAGGGTCATTGTATCAGCATTCGAGGGAAATTTGGGTCAGTTCGAAAACCAAGGGCCAGCACAAGGGAAGGTTGTAAAGCAATGATTCATATCAAATATGATAAGTCTGCAAAATGGGTGATAACAAAATTTGTGAAGGATCATAATCATCCACTGGTAGTCTCTCCACGAGAAGCACGCCAAACAATGGATGAGAAGGATAAGAAAATTCAAGAATTAACAGCAGAGCTTCGGAATAAAAAACGATTATGCGCAACATATCAGGAACAGTTGACTTTTTTTATGAAAATTGTTGAAGAGCACAGTAATAAGCTTTCTACGAAAGTTCATCATGTAGTTAATAATCTTAAAGAATTTGAATCCATGGAAGAGCTGTTGCACCAGACTTAG 726 0.4008 MESRLIEGNGEMEVSGDVSLSTYEVQIHQETYEVDPNEGCRALESSSGGELGICDDHAIQEPYEGMEFDSEDAAKIFYDEYARRVGFVMRVMSCRRSEKDGRILARRLGCNKEGHCISIRGKFGSVRKPRASTREGCKAMIHIKYDKSAKWVITKFVKDHNHPLVVSPREARQTMDEKDKKIQELTAELRNKKRLCATYQEQLTFFMKIVEEHSNKLSTKVHHVVNNLKEFESMEELLHQT* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3189 241 Coils Coil 175 202 - -
Apr9g3189 241 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 29 240 - -
Apr9g3189 241 Pfam FAR1 DNA-binding domain 77 165 IPR004330 -
Apr9g3189 241 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 29 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3189 Apr-Chr9 38646302 38667227 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Apr9g3189 FAR1 6.3e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3189 - - gmx:100787741 447.973