Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3163 ATTGGAACTGACACTACTGCGGTGACATTAGAATGGGCAATTTCAGAACTTGTGAGGAATCCAACGATAATGAAGAAAGCAAAGGAAGAAGTGAGAAAAATTATCGTGAATAAATCAAATATAGAAGAAAATGACATCAATCAAATGCATTACCTAAAGTGCGTGGTCAAAGAAACTCTAAGGTTACACCCACCAGGTACCCTTCTGGCTCCTCGGGAAACAATATCTAGCGTTAAATTGAAAGGGTACGATGTTCCTGCAAAAACAATGGTATATATCAATGCATGGGCAATTCAAAGAGACCCTAAATTTTGGAAAAGCCCTGAAGAATTCTTGCCAGAGAGATTTGAAAACAGTGAGCTTGATTTTAGAGGTCAAGATTGTCAGTTTATTCCATTTGGTTTTGGGAGAAGAGGATGTCCTGGAATAAATTTTGGAGTCACTTCAATAGAGTATGTTCTTGCCAACCTTCTTTATTGGTTCGATTGGAAGCTGCCTGAATCTGATACACTTAAGCAAGACATAGACATGAGTGAGATATTTGGACTCGTTGTCTCGAAGAAAATGCCACTTCATCTTAAACCGATACCGTTTTGA 597 0.3836 IGTDTTAVTLEWAISELVRNPTIMKKAKEEVRKIIVNKSNIEENDINQMHYLKCVVKETLRLHPPGTLLAPRETISSVKLKGYDVPAKTMVYINAWAIQRDPKFWKSPEEFLPERFENSELDFRGQDCQFIPFGFGRRGCPGINFGVTSIEYVLANLLYWFDWKLPESDTLKQDIDMSEIFGLVVSKKMPLHLKPIPF* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3163 198 Gene3D Cytochrome P450 1 195 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g3163 198 PRINTS P450 superfamily signature 1 18 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g3163 198 PRINTS P450 superfamily signature 54 65 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g3163 198 PRINTS P450 superfamily signature 131 140 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g3163 198 Pfam Cytochrome P450 2 182 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g3163 198 PANTHER CYTOCHROME P450 71B11-RELATED 2 197 - -
Apr9g3163 198 SUPERFAMILY Cytochrome P450 2 197 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g3163 198 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 133 142 IPR017972 GO:0005506|GO:0016705
Apr9g3163 198 Coils Coil 24 44 - -
Apr9g3163 198 PRINTS E-class P450 group I signature 10 36 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g3163 198 PRINTS E-class P450 group I signature 53 71 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g3163 198 PRINTS E-class P450 group I signature 94 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g3163 198 PRINTS E-class P450 group I signature 130 140 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g3163 198 PRINTS E-class P450 group I signature 140 163 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g3163 198 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 2 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3163 Apr-Chr9 38404124 38404751 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3163 2 196 Cytochrome P450 AT3G26230 52.284 6.74e-73 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3163 K20617 - gmx:100803384 339.732