Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3161 ATGGCTCTCAAACAGTGGCTGTATGAGCAAATGAATCAAATGTTATCTTCAAGTTCTACCTTTTATCTATCTCTTCTCTCCTTTATCAGCTTCCTCTATGTGTTTAAGCTCTTAAGAAAAACCAAATCCAAAACAAACCTGATCAATTTGCCTCCATCACCACCAAAACTACCATTCATAGGCAATCTGCATCAGTTAGGTGAACTGCCACATCGATCTCTTCGAGATCTCTCACTCAGGTATGGTGACATCATGTTGTTGCAGTTGGGGCAGATGCATACTCCAACTCTGGTGGTTTCATCTGTAGATGTTGCCATGGAAATCATGAAAACACATGACGTTGCTTTTTCAAACCGACCCCAAAACACTGCTGCAAAAATCTTAGTGTATGGTTGTGCCGACATTCTTTTTTCACCGTATGGAGAAAGATGGAGGCAGAAAAGAAAAATATGTGTCCTTGAACTTCTGAGCATGAAAAGGGTTCAATCATTTCATCTCATCAGAGAAGAAGAAGTTGCCAAATTGGTGAATAAGATACGGGAAGCATGCTCCAGTGATCCTTGCTACGTGAATCTAAGTGAGATGCTGACATCAACATCAAACGATATTGTTAGTAAATGTGTTTTGGGAGGGAAATACGCGGGAGATGGTTACAGCAGTGTCAAAGAGTTATCAAGGAATGTTATGGTTCATCTTGCTGCTTTCACCTGGAGAGATTATTTCCCTTTGTTGGGTTGGATTGATGTGCTCACTGGAAAAATTAAGGAATACAAGGCCACTTCTAGAGCAATTGATGCTTTATTAGATCAGGCAATTGAAGAGCATTTCACAGTGAAGACAGAAGGCGACCACTCCAAAAAGAAAGCCTTGGTCGATATCCTTCTCCAACTTCAAGAGAACAGCATGCGTAATAACTTTGAGCTCACCAGAAATGACCTCAAAGCACTGCTAGTGGATATGTTTGTTGGAGGAACTGACACTACTGCGGTGACATTAGAATGGGCAATTTCAGAACTTGTGAGGAATCCAATGATAATGAAGAAAGCAAAGGAAGAAGTGAGAAAAATTATAGGGAATAAATCAAATATAGAAGAAAATGACATCAATCAAATGCATTACCTAAAGTGCGTGGTCAAAGAAACTCTAAGGTTACACCCACCAGGTACCCTTCTGGCTCCTCGGGAAACAATATCTAGCGTTAAATTGAAAGGGTACGATGTTCCTGCAAAAACAATGGTATATATCAATGCATGGGCAATTCAAAGAGACCCTAAATTTTGGAAAAGCCCTGAAGAATTCTTGCCAGAGAGATTTGAAAACAGTGAGCTTGATTTTAAAGGTCAAGATTGTCAGTTTATTCCATTTGGTTTTGGAAGAAGAGGATGTCCTGGAATAAATTTTGGAGTCACTTCAATAGAGTATGTTCTTGCCAACCTTCTTTATTGGTTCGATTGGAAGCTGCCTGAATCTGATACACCTAAACAAGACATAGACATGAGTGAGATATTTGGACTCGCTGTCGCAAAGAAAGTACCACTTCATCTTAAACCGACACCGTTTTGA 1563 0.3992 MALKQWLYEQMNQMLSSSSTFYLSLLSFISFLYVFKLLRKTKSKTNLINLPPSPPKLPFIGNLHQLGELPHRSLRDLSLRYGDIMLLQLGQMHTPTLVVSSVDVAMEIMKTHDVAFSNRPQNTAAKILVYGCADILFSPYGERWRQKRKICVLELLSMKRVQSFHLIREEEVAKLVNKIREACSSDPCYVNLSEMLTSTSNDIVSKCVLGGKYAGDGYSSVKELSRNVMVHLAAFTWRDYFPLLGWIDVLTGKIKEYKATSRAIDALLDQAIEEHFTVKTEGDHSKKKALVDILLQLQENSMRNNFELTRNDLKALLVDMFVGGTDTTAVTLEWAISELVRNPMIMKKAKEEVRKIIGNKSNIEENDINQMHYLKCVVKETLRLHPPGTLLAPRETISSVKLKGYDVPAKTMVYINAWAIQRDPKFWKSPEEFLPERFENSELDFKGQDCQFIPFGFGRRGCPGINFGVTSIEYVLANLLYWFDWKLPESDTPKQDIDMSEIFGLAVAKKVPLHLKPTPF* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3161 520 Pfam Cytochrome P450 51 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g3161 520 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g3161 520 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g3161 520 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g3161 520 PRINTS E-class P450 group I signature 78 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g3161 520 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g3161 520 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g3161 520 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g3161 520 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g3161 520 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g3161 520 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g3161 520 PANTHER CYTOCHROME P450 71B11-RELATED 14 518 - -
Apr9g3161 520 Gene3D Cytochrome P450 35 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g3161 520 Coils Coil 346 366 - -
Apr9g3161 520 SUPERFAMILY Cytochrome P450 51 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g3161 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Apr9g3161 520 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 14 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3161 Apr-Chr9 38380352 38383563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3161 51 520 Cytochrome P450 AT3G26330 46.203 1.25e-143 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3161 K20617 - gmx:100803384 775.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3161 9 38380352 38383563 Apr9g3161 9 38380352 38383563 ECH