Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3147 ATGGCATCCAAACCCATTGATAACAACAACAATACTCTTAAGTTTCTGTATAGCTACGGCGGCATGATCCGTCCTCGCTCCCCCGACGGCAAGCTTCGCTACACCGGTGGCCACACCAGAGTCCTCGCCCTTCATCCTCCCACTCCTTTCTCAGAGTTGAAGGCAAAGCTTTGCGAGTTGGGTGGTTCGTCGTCGATAACCATCAAGTGTCCATTGCCGGACGGAGAGTTAGACACTTTGGTTTCCATCACCAACGACGAAGATTTGGCAAACATAATCGAAGAATACGATCGTGCTTCTTCGTCGTTGCAGAAACAGTTGAAAATCAAAGTCATTCTTTTTCCACCGAGGAAATCATCGCCTCTTCCGTCTTCGTCCTCCACCGCCACTCTCTCTGCGTCCGGTTCGCCTAACTCCTCTGCCGAATCGCTGCCATATTCGGCGGAGAATCGGTTCGTCCGGCGGTATTGCTCGCCGGTGCCGGTTGGTTATAAGCATGGCGTCCGTAACGGTTGTTGGCACACAAGGACCAGGCATGCCGATGAAGGCCCAAGATTCCTTTGTCGTGGGCCTCACTGCTATAATTACTGCCACTGA 597 0.5226 MASKPIDNNNNTLKFLYSYGGMIRPRSPDGKLRYTGGHTRVLALHPPTPFSELKAKLCELGGSSSITIKCPLPDGELDTLVSITNDEDLANIIEEYDRASSSLQKQLKIKVILFPPRKSSPLPSSSSTATLSASGSPNSSAESLPYSAENRFVRRYCSPVPVGYKHGVRNGCWHTRTRHADEGPRFLCRGPHCYNYCH* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3147 198 MobiDBLite consensus disorder prediction 119 144 - -
Apr9g3147 198 CDD PB1_UP2 18 114 - -
Apr9g3147 198 SUPERFAMILY CAD & PB1 domains 29 121 - -
Apr9g3147 198 PANTHER PB1 DOMAIN PROTEIN 1 198 - -
Apr9g3147 198 Pfam PB1 domain 29 114 IPR000270 GO:0005515
Apr9g3147 198 Gene3D - 31 113 - -
Apr9g3147 198 PANTHER OS05G0427100 PROTEIN-RELATED 1 198 - -
Apr9g3147 198 SMART PB1_new 27 114 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3147 Apr-Chr9 38283774 38284464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3147 13 114 MAP Kinase Kinase Kinase AT5G57610 41.176 1.63e-19 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3147 - - gsj:114393520 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3147 9 38283774 38284464 Apr9g3147 9 38283774 38284464 ECH
Apr9g3147 9 38283774 38284464 Apr1g0771 1 9286863 9288553 PCT