Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3145 ATGATGGGTACGATAAAGATTCTCACTATCCTCCAACTGTGTCTCTTTCTCTTAGTCCCTCCCACGCTTTCGCTGGACTTCATATTCAACTCATTCACCGCCATCACTAACCTCACTCTCATCAAAGACGCACGCATCGACGCCTCTGTCATACGCATCACCAACGACTCCAACCAATACTCTTATGGCCGAGCCTTCTACCCGACAAAGATTCCCATGAAACCCTTCCCCAATTCCTCAACCATTTCCTCATTCTCCACCTCCTTCGTCTTCTCCATCTTGCCACAGATCCCCACCAGCCCAGGCTTCGGTCTCGCCTTTCTCCTCTGCAACACCACTTCCCCTCCCGGTGCTCTCGCCAGCCAGTACTTTGGCCTGTTCACCAACGAAACCTCTCCCTCCCCTTTCCCTCTCATCGCCGTCGAATTCGACACCGGACAGAATCCCGAGTTCAACGACATCGACGACAATCACATCGGCATCGATCTCAACAACATCGTTTCCGTGTTCTCAACCCCTGCAGGATACTACAATTCCAGCGCCGCCTTTGTCCCCCTTCGCATGCGCACTGGTCAAAACATCCACGCTTGGATCGATTTCAACAGCGAGAGTTTCCAGATTAACGTCACCGTCGCGCCGATCGGCGTTCCGCGCCCCACGAAGCCCACGCTTTCATATAGAGATCCCACCATAGCTAACTACGTTTCTGCTGATATGTACGTTGGGTTCTCCGCTTCTAAAACGAACTGGATCGAGGCACAGAGAGTTCTGGCATGGAGCTTCAGCGATTCAGGGCCAGCAAGGGACCTTAACACCACGAATTTGCCAGTTTTCGAACCAGAATCATCTTCTTCCTCGCTTTCTGCTGGGGCAATAGCAGGGATTGTGGTGGGTTGTTTTGCGTTTGTGGTGATTTGTACATGTGGGGTTTACTTATGGTGGAGAAACAAAAAAGCTAAAGAGGAAGAAGACGACGAGATCGAAGATTGGGAGCTAGAGTACTGGCCACACAGGTTTTCATACGAGGAACTGAGCGTGGCAACAGGGGAGTTTGGGAAGGAGCAGTTGTTAGGTTCTGGAGGGTTCGGAAGAGTTTACAGAGGAACACTATCGAAGAACGCGCAAGTTGCGGTGAAGTGCGTGAACCACGATTCGAAACAAGGGTTGCGAGAGTTCATGGCGGAGATATCGAGCATGGGGAGGTTGCAGCACAAGAACTTGGTTCAAATGCGAGGGTGGTGTAGAAAAGGTAACGAGCTTATGTTGGTTTATGATTACATGCCTAATGGAAGCCTCAACAAATGGGTGTTCGATAAACCGGAGAAGCTTCTGGGGTGGGAGCAACGGCGTCGTATCCTTGTCGACGTGGCAGAGGGGCTTAACTACCTTCATCACGGTTGGGACCAGGTTGTTATTCATAGGGATGTGAAATCTAGTAACATATTGTTGGACGCCGACATGCGAGGAAGACTAGGGGACTTTGGTTTGGCCAAGCTTTACCAACACGGGGAGGTTCCCAACACCACGCGCGTAGTTGGCACGTTGGGGTATTTGGCGCCGGAGTTGGCTACGGTTGCCGCGCCTACGTCGGCGAGTGACGTGTACAGTTTTGGGGTGGTGTTGTTGGAGGTGGCGTGCGGGAGGAGGCCCATAGAGACGTCGGTGCCGGAGGAGGAGGTGGTGCTTATTGATTGGGTGAGGGAGTTGTACGCGAAGGGGTGTGCGTGTGAGGCTGCGGATGCTAGGATTATGGGTGAGTATGATGTGGGGGACATGGAGATGGTGTTGAAGCTTGGGTTGGCTTGTTGCCACCCTGACCCTCAGAGGAGACCCACCATGAAGGAAGTTGTTGCTCTTCTCCTCGGAGAGGACCTCCCGGAGGCACCCCGGAAGGTGCTTTCTGATTTGGTTCGCGACGGAGATGACACCCCCGGCGGCGGGGACTTGGATGAGGCGGCGCCTTTGCAACCCTCCACTCTGGTTTGA 1986 0.5312 MMGTIKILTILQLCLFLLVPPTLSLDFIFNSFTAITNLTLIKDARIDASVIRITNDSNQYSYGRAFYPTKIPMKPFPNSSTISSFSTSFVFSILPQIPTSPGFGLAFLLCNTTSPPGALASQYFGLFTNETSPSPFPLIAVEFDTGQNPEFNDIDDNHIGIDLNNIVSVFSTPAGYYNSSAAFVPLRMRTGQNIHAWIDFNSESFQINVTVAPIGVPRPTKPTLSYRDPTIANYVSADMYVGFSASKTNWIEAQRVLAWSFSDSGPARDLNTTNLPVFEPESSSSSLSAGAIAGIVVGCFAFVVICTCGVYLWWRNKKAKEEEDDEIEDWELEYWPHRFSYEELSVATGEFGKEQLLGSGGFGRVYRGTLSKNAQVAVKCVNHDSKQGLREFMAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDYMPNGSLNKWVFDKPEKLLGWEQRRRILVDVAEGLNYLHHGWDQVVIHRDVKSSNILLDADMRGRLGDFGLAKLYQHGEVPNTTRVVGTLGYLAPELATVAAPTSASDVYSFGVVLLEVACGRRPIETSVPEEEVVLIDWVRELYAKGCACEAADARIMGEYDVGDMEMVLKLGLACCHPDPQRRPTMKEVVALLLGEDLPEAPRKVLSDLVRDGDDTPGGGDLDEAAPLQPSTLV* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3145 661 PANTHER - 8 642 - -
Apr9g3145 661 Gene3D - 23 278 - -
Apr9g3145 661 CDD lectin_legume_LecRK_Arcelin_ConA 25 265 IPR001220 GO:0030246
Apr9g3145 661 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 278 IPR013320 -
Apr9g3145 661 CDD STKc_IRAK 357 620 - -
Apr9g3145 661 Gene3D Transferase(Phosphotransferase) domain 1 427 631 - -
Apr9g3145 661 MobiDBLite consensus disorder prediction 636 661 - -
Apr9g3145 661 Pfam Protein kinase domain 353 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g3145 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Apr9g3145 661 Gene3D Phosphorylase Kinase; domain 1 336 426 - -
Apr9g3145 661 ProSiteProfiles Protein kinase domain profile. 351 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g3145 661 SUPERFAMILY Protein kinase-like (PK-like) 328 620 IPR011009 -
Apr9g3145 661 Pfam Legume lectin domain 24 275 IPR001220 GO:0030246
Apr9g3145 661 ProSitePatterns Legume lectins beta-chain signature. 139 145 IPR019825 -
Apr9g3145 661 SMART serkin_6 351 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g3145 661 ProSitePatterns Protein kinases ATP-binding region signature. 357 379 IPR017441 GO:0005524
Apr9g3145 661 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.1 8 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3145 Apr-Chr9 38262032 38265840 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3145 24 625 Receptor kinase-like Gene Family AT1G15530 67.647 0.0 814
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Apr9g3145 Pkinase 2.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3145 - - gmx:100780660 1092.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3145 9 38262032 38265840 Apr9g3145 9 38262032 38265840 ECH