Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3143 ATGGAAGATAAAGATCGCACCCCAACACAAGCAAAGGACTATTATTCTGGATCAATATGGTGGTCACAAACTGCACAGGCATTTGAGGATCTCAAGAGAAGTGACATAAATGGAGTTAATGGGATTTTTACTGCTGGCAGAGATTGCTACAGCTATAACTCACAAGAAATAGTGACTCCTGAAATTTCTGAAACATTTGGAGAAAACAAAGGTTTAAATAGGACAGGTAATGGAGTTCATGATATCTCTGAGGCTAGTGGTGAAGAATACAGGGAGTATGGCCTTTCTAGACTTAAATTAACAACAGAAATTGTGGAAATAGTTGAGGATGGCATAAGCATAACAAGCAACAAAGATAGAAGAGTTGATGACCTTTATGTGGCTGTTGGCAAAGATGACTTTGATGTTGTGAAATGGGCTCTTGATCATGCTGTTTCTCCCGGTGCCCGGATTTTTCTTATCCATGTCTCTTCTCCAATTACATTCATTCCTACGCCAGTTGGGAAGTTAGAAAGAAGACAAATGAGCTCGCCCCAAGTGAGACTTTACGTGAATGAAGTGAATAACAAGAGGAAGGATCTCTTGCAGAAGTACATCCAGCAGAGTACAGAAGCCAAGGTAGCAGCAGAAACGTTGCTTCTTGAGAGCAATGACACAGGAAAAGCCATTCTGGATCTCATCTCTATTCTTAACATAACCAACCTTGTCATGGGAATGAAAAAGCCCTTCACAAGGCGCAATAACAAATTGAGCAAAGGAGAGTTCGTAAAAAAAAATGCACCCATTTCCTGTGAAGTTACATTGGTTTATGATGGCAAGGTGTTTGTGTCTGACCGTTACATGGATGGCTTGGGTGCGTTAGAAGAGACAAGGAAAACTAATAAATTCCATGCACTTGCAAAAGTGAGTCCTGAGGGTCGAGTACTCAGTTGTTCATGGAACGTACTGGTTTGCTGA 957 0.4107 MEDKDRTPTQAKDYYSGSIWWSQTAQAFEDLKRSDINGVNGIFTAGRDCYSYNSQEIVTPEISETFGENKGLNRTGNGVHDISEASGEEYREYGLSRLKLTTEIVEIVEDGISITSNKDRRVDDLYVAVGKDDFDVVKWALDHAVSPGARIFLIHVSSPITFIPTPVGKLERRQMSSPQVRLYVNEVNNKRKDLLQKYIQQSTEAKVAAETLLLESNDTGKAILDLISILNITNLVMGMKKPFTRRNNKLSKGEFVKKNAPISCEVTLVYDGKVFVSDRYMDGLGALEETRKTNKFHALAKVSPEGRVLSCSWNVLVC* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3143 318 Pfam Universal stress protein family 135 241 IPR006016 -
Apr9g3143 318 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 85 294 - -
Apr9g3143 318 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 85 294 - -
Apr9g3143 318 CDD STK_N 126 272 - -
Apr9g3143 318 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 133 240 - -
Apr9g3143 318 Gene3D HUPs 127 252 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3143 Apr-Chr9 38254261 38256884 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3143 112 274 U-box Gene Family AT5G65500 30.857 1.41e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3143 - - pvu:PHAVU_003G204300g 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3143 9 38254261 38256884 Apr9g3143 9 38254261 38256884 ECH