Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3138 ATGAGTAACCCTAACCCCAACCCAGAAGAGGAGAAGAGGCTCCAGGATGAGCTGTTGGGTCCCATCATACTCGGAGAAAGAGTCATAAAACTGGCTGAGGAGGCTGAGTCATCCAAGGGGGACTGCACGGACCTCGCGAAGAAGGTGCAGGTGCTGTGCGACAACCTACGCTCCGTCGTGCGCGTCGTGTCGGGGAGTCAGTGCGTCAACGAGCGCCCCATACGTCGCATCGTCGGCGAGGTCTCCAAAAACCTAGAGCGCACGTTAGCACTCGTTCGCAAATGCAAGAAGCACGGAGGCGTCCTCCGCCAGGTGTTCTCCATGACCACCACTGCCGACTTCCGGAAGGTCTGGAACCTTCTGGAATCTTCGAACGGCGACATGGTGTGGCTCCTCAGCATCTTCGACTCCAAAGGCACCAATCTCTCCCTCCCTCCCATCGCCAGCAACGACCCCATCCTTGCTTGGGTCTGGACCTACACCTACACCCTCCAATTGGGCCAGCCCAAGGACCGCGCCGAAGCCGCCACCGAGCTTGGTTCACTTGCGAAGGACAACGACCGCAACAAGTTCATCATCTTGGATGAAGGTGGGGTGTTGCCGCTCCTCAAGCTTCTCAAGGAAGCTGCTTCTCCCGATGCTCAGGTTGCTGCCGGCAATGCTCTCGTCAACATTGCCACTAATCAAGATAGGGTCGTTAATTTCATAGTGGATTCCCATTCTGTCCCCACCATTGTTCAGGTCCTCGGTGATTCTCCTATGAGGGTTCGTGTTTCTTGCGCCAATTTGGTAGCTGTCATGGCCGAGCAAGACACCCATGCCCGTGAGGAGTTTGTGAGGGCCAATGTGACTAGGCCTCTAGTGTCCTTGTTGTCCATGGATACCGTCCTTGCCGACCCCATGGCAGGCCGTGCCAGCATTCATTCCCTGGTTCTGAATTTGTCCTCCGCAAAGGAGGCCAATTCGGATGGGAGTGGCAGAGGGAGCAACCACCATCGCAGGGAAAGGGAAAAAGAGGTTGAGAGCCTGGAGTTGAGGAATGATGTCAAAGTCAGTTGTGCTAAGGCTCTTTGGAAACTCTCTACGGGGTGTCTTTTAGCTTGCAGGAAGATTACTGAGACTAAAGGTTTGCTTTGTCTCGCAAAGATTATTGAGACTGAGAGTGGGGAATTGCAGTTCAATTGTCTTATGGCTGTTACGGAGATTGCCGCTGTGGCAGAGTCGAATGCTGATCTTAGAAGAGTTGCTTTTAAGAGAACTGCTCCGGCGGCAAAGGCAGTGTTGGATCAGCTTTTGAGAGTGGTTCAGGAAGAGAGCAATGTGGCATTGCAGATTCCTGCCATTAAGGCGATTGGGTCCTTGGCCAGAAACTTCTCTGGAAAGGTTCCACAAGTTCTTGGTCCTTTAGTTGACCAGCTTGGTAACCGAGATGTTGATGTAGCAAGTGAAGCTGCCATTGCTTTGGGGAAGTTTGTTTGCCAGGAAAACTACAACTTTGTTGACCATTCTAAATCAATACTTGAGCTTGATGGAATTCCCAAGTTGATGAGCTTGCTGCAGTTTAATGATCGTCAACAAGTGCATGGCCTAAAATTACTTTGTTACCTTGCCTTAAATGTAGGTGACAGTAAGGTTCTTGAGCAAGCGCGTGCCTTGAGTACTATAGAGAGGTTTGCTCGTCCTGTTTTAGCTCAACATCCTGATATGAAAGATCTCTTGGCAAAGGCCATACACCACCTCACTCTTTATCAGCCAGGAGCTCAATTGCACAGACAGCCCTTGGGGCTGTAA 1791 0.5159 MSNPNPNPEEEKRLQDELLGPIILGERVIKLAEEAESSKGDCTDLAKKVQVLCDNLRSVVRVVSGSQCVNERPIRRIVGEVSKNLERTLALVRKCKKHGGVLRQVFSMTTTADFRKVWNLLESSNGDMVWLLSIFDSKGTNLSLPPIASNDPILAWVWTYTYTLQLGQPKDRAEAATELGSLAKDNDRNKFIILDEGGVLPLLKLLKEAASPDAQVAAGNALVNIATNQDRVVNFIVDSHSVPTIVQVLGDSPMRVRVSCANLVAVMAEQDTHAREEFVRANVTRPLVSLLSMDTVLADPMAGRASIHSLVLNLSSAKEANSDGSGRGSNHHRREREKEVESLELRNDVKVSCAKALWKLSTGCLLACRKITETKGLLCLAKIIETESGELQFNCLMAVTEIAAVAESNADLRRVAFKRTAPAAKAVLDQLLRVVQEESNVALQIPAIKAIGSLARNFSGKVPQVLGPLVDQLGNRDVDVASEAAIALGKFVCQENYNFVDHSKSILELDGIPKLMSLLQFNDRQQVHGLKLLCYLALNVGDSKVLEQARALSTIERFARPVLAQHPDMKDLLAKAIHHLTLYQPGAQLHRQPLGL* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3138 596 Gene3D - 160 324 IPR011989 -
Apr9g3138 596 SMART arm_5 228 269 IPR000225 GO:0005515
Apr9g3138 596 SMART arm_5 499 538 IPR000225 GO:0005515
Apr9g3138 596 SMART arm_5 271 316 IPR000225 GO:0005515
Apr9g3138 596 SMART arm_5 185 227 IPR000225 GO:0005515
Apr9g3138 596 SMART arm_5 364 404 IPR000225 GO:0005515
Apr9g3138 596 Gene3D - 335 590 IPR011989 -
Apr9g3138 596 PANTHER ARMADILLO REPEAT ONLY 1 PROTEIN 9 594 - -
Apr9g3138 596 MobiDBLite consensus disorder prediction 325 339 - -
Apr9g3138 596 Gene3D - 17 134 IPR036537 GO:0007166
Apr9g3138 596 MobiDBLite consensus disorder prediction 318 339 - -
Apr9g3138 596 PANTHER ARMADILLO REPEAT ONLY 4 9 594 - -
Apr9g3138 596 SUPERFAMILY ARM repeat 168 555 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3138 Apr-Chr9 38220633 38226938 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3138 168 292 U-box Gene Family AT2G28830 31.200 3.58e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3138 - - gmx:100813824 1002.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3138 9 38220633 38226938 Apr9g3138 9 38220633 38226938 ECH